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cgplab / Rockermeth

A tool for discovering Differentially Methylated Regions
MIT License
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differential-methylation methylation

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Rockermeth

DOI

Rockermeth is a tool for discovering Differentially Methylated Regions (DMRs).

A detailed description of this methodology is available here

Installation

You can install Rockermeth from github with:

# install.packages("devtools")
devtools::install_github("cgplab/Rockermeth")

Generate vignette with:

# install.packages("devtools")
devtools::install_github("cgplab/Rockermeth", build_vignettes = TRUE)

If you use this package in your work please cite:

Benelli, M., Franceschini, G.M., Magi, A. et al. Charting differentially methylated regions in cancer with Rocker-meth Commun Biol 4, 1249 (2021). https://doi.org/10.1038/s42003-021-02761-3