chorus-ai chorus_waveform issues

chorus-ai / chorus_waveform

CHoRUS waveform documentation and various waveform conversion scripts

MIT License

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issues

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UF WFDB Conversion Code

#95 dvellanki closed 1 week ago
1
Open once read many

#94 tcpan opened 1 month ago
6
Allow AtriumDB to output time information in its native format and add further optimizations.

#93 WilliamDixon opened 1 month ago
1
Benchmarking - don't load waveform for each random access read

#92 briangow opened 1 month ago
12
"Post results to pull request" action is failing with a permissions error

#90 tompollard closed 2 months ago
2
Add SNR calculation for signal fidelity

#87 matthewreyna closed 2 months ago
1
Improve AtriumDB performance in waveform benchmark tests

#86 WilliamDixon closed 2 months ago
7
DICOM Fidelity Check failure

#84 tcpan closed 1 month ago
12
DICOM Fidelity Check failures

#83 tcpan closed 3 months ago
2
Add script and CSV for plotting benchmarking results

#82 briangow closed 3 months ago
0
Add cloud hardware benchmarking

#81 jshoughtaling closed 3 months ago
0
ENH: memory usage profiling

#80 tcpan closed 1 month ago
9
added compressed version of npy format

#79 del42 closed 3 months ago
1
Minimize hardware resource requirements for users when working with waveforms

#78 briangow closed 3 months ago
15
Format dicom

#77 tcpan closed 3 months ago
1
DICOM Format - IndexError: too many indices for array

#76 briangow closed 3 months ago
6
DICOM format - KeyError: 'PLETH'

#75 briangow closed 3 months ago
2
updated parquet handler

#74 del42 closed 3 months ago
1
Format parquet organized for compressed vs uncompressed

#73 del42 closed 3 months ago
0
WFDB `psf_fseek` bug happening again

#72 briangow closed 3 months ago
6
FIX: for read, input array and output array may have sizes differ by 1.

#71 tcpan closed 3 months ago
2
Add MIMIC-IV p169 waveform

#70 briangow closed 3 months ago
0
DICOM format - shape error

#69 briangow closed 3 months ago
2
Update DICOM format fidelity setting

#68 briangow closed 3 months ago
3
Restore "zarr format compressed signal handler added" commit

#67 briangow closed 3 months ago
1
Containerize and create `chorus-waveform` image

#66 jshoughtaling closed 4 months ago
1
Update code to resolve Fidelity check errors

#65 briangow closed 3 months ago
7
Benchmarking - CCDEF - Fidelity check sign error

#64 briangow closed 3 months ago
3
Work around "psf_fseek" bug

#63 bemoody closed 4 months ago
1
Benchmarking - WFDB - Fidelity check errors

#62 briangow closed 3 months ago
5
added atriumdb benchmark code

#61 tcpan closed 4 months ago
3
Benchmarking - handle all NaN signal for WFDB `write_waveform` format

#60 briangow closed 4 months ago
2
Added several more signal types.

#59 tcpan closed 4 months ago
3
Tidying Vital format for the purpose of testing

#58 dldmstjs500 closed 4 months ago
1
Summarize benchmarking runs

#57 briangow closed 4 months ago
0
bug fix for test cases

#56 dldmstjs500 closed 4 months ago
0
made bug fixes on VitalFormat

#55 dldmstjs500 closed 4 months ago
1
updated DICOM to use private metadata tags to speed up file load.

#54 tcpan closed 4 months ago
2
Add additional waveform signal to IOD definitions

#53 briangow closed 3 months ago
7
Format dicom

#52 tcpan closed 4 months ago
6
Format vital

#51 dldmstjs500 closed 4 months ago
6
Tidying DICOM format for the purpose of testing #42

#50 tompollard closed 4 months ago
2
Skip benchmark classes beginning with `Base` in the benchmark workflow

#49 tompollard closed 4 months ago
0
Tidying CCDEF format for the purpose of testing #42.

#48 tompollard closed 4 months ago
4
Tidying Zarr format for the purpose of testing #42.

#47 tompollard closed 4 months ago
1
Push benchmark results to the pull request.

#46 tompollard closed 4 months ago
0
Minor changes to the benchmark workflow

#45 tompollard closed 4 months ago
0
Update benchmark workflow to find classes within benchmark files.

#44 tompollard closed 4 months ago
0
Tidying, for the purpose of testing #42

#43 tompollard closed 4 months ago
3
[WIP] Add workflow to run new and modified benchmarks

#42 tompollard closed 4 months ago
3