cianfrocco-lab COSMIC-CryoEM-Gateway issues

cianfrocco-lab / COSMIC-CryoEM-Gateway

Web platform for analyzing cryo-EM data on Comet cluster at San Diego Supercomputer Center

http://cosmic-cryoem.org

GNU General Public License v3.0

9 stars 1 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Bump hibernate-core from 5.2.3.Final to 5.3.20.Final in /globus_sources/portal

#302 dependabot[bot] opened 1 year ago
0
Bump struts2-core from 2.5.26 to 2.5.30 in /globus_sources/portal

#301 dependabot[bot] opened 2 years ago
0
Bump hibernate-core from 5.2.3.Final to 5.4.24.Final in /globus_sources/portal

#300 dependabot[bot] closed 1 year ago
1
Bump struts2-core from 2.3.35 to 2.5.26 in /globus_sources/portal

#299 dependabot[bot] closed 2 years ago
1
Bump struts2-core from 2.3.35 to 2.5.22 in /globus_sources/portal

#298 dependabot[bot] closed 2 years ago
1
Intermediate results not displaying

#297 mcianfrocco closed 3 years ago
0
Creating Globus shared endpoint ACL doesn't work on production gateway

#296 monaw closed 3 years ago
2
globus upload succeeds but data items not listed

#295 kenneth59715 closed 3 years ago
0
Relion 2D job failed

#294 monaw closed 3 years ago
0
Displaying SU usage per resource to users

#293 mcianfrocco opened 3 years ago
0
Expanse intermediate results

#292 mcianfrocco closed 3 years ago
1
SSL certificate renew

#291 mcianfrocco opened 3 years ago
0
Versioning COSMIC2 gateway software

#290 mcianfrocco opened 3 years ago
0
Storage value on Portal doesn't agree with data size on gateway

#289 mcianfrocco opened 3 years ago
2
Delete ACL after data transfer

#288 mcianfrocco opened 3 years ago
0
Address pom.xml security alert

#287 mcianfrocco closed 3 years ago
1
GitHub authentication deprecation!

#286 monaw opened 3 years ago
0
Cleanup log output for better usage tracking?

#285 monaw opened 3 years ago
0
Hosted solution

#284 mcianfrocco opened 3 years ago
1
Add atomic model to map via phenix

#283 mcianfrocco opened 3 years ago
0
new user Globus upload page error

#282 monaw opened 3 years ago
0
new cosmic2dev account

#281 monaw closed 3 years ago
0
globus upload doesn't find .star file in nested directory?

#280 kenneth59715 closed 3 years ago
1
Add Multimodel

#279 mcianfrocco opened 3 years ago
0
Add reslog plotting

#278 mcianfrocco opened 3 years ago
0
Add FDR-FSC

#277 mcianfrocco opened 3 years ago
0
GitHub security alert!

#276 monaw closed 3 years ago
0
Bump junit from 4.2 to 4.13.1 in /gateway_config/portal

#275 dependabot[bot] opened 3 years ago
5
Bump junit from 4.2 to 4.13.1 in /globus_sources/portal

#274 dependabot[bot] opened 3 years ago
0
Add phenix map to model

#273 mcianfrocco opened 3 years ago
0
Add LocSpiral/LocBFactor/LocOccupancy

#272 mcianfrocco closed 3 years ago
0
Add correct version number to deepEMhancer

#271 mcianfrocco closed 3 years ago
1
Refresh between when a job finishes to when it is marked as 'complete' on the gateway

#270 mcianfrocco closed 3 years ago
5
Hyperlinks for tools do not link out to designated URLs

#269 mcianfrocco closed 3 years ago
3
Check volume size to set batch size automatically for deepEMhancer

#268 mcianfrocco closed 3 years ago
0
Output image of final iteration

#267 mcianfrocco opened 4 years ago
0
Update help to include 'Live preview' info

#266 mcianfrocco opened 4 years ago
0
Add local deblur software

#265 mcianfrocco opened 4 years ago
0
Increase number of characters shown in pull down menu for data item in task

#264 mcianfrocco closed 4 years ago
6
Progress bar for uploads

#263 mcianfrocco closed 4 years ago
3
Github permissions error on cosmic2dev server github repo

#262 mcianfrocco closed 4 years ago
9
cpsarc2star.py input Globus upload files

#261 mcianfrocco opened 4 years ago
0
Include output jpg files from runs

#260 mcianfrocco opened 4 years ago
0
Ingest cryoSPARC directly

#259 mcianfrocco opened 4 years ago
0
Add deepEMhancer to COSMIC2

#258 mcianfrocco closed 3 years ago
0
Jobs not stopping when RELION 'file does not exist' error comes up

#257 mcianfrocco opened 4 years ago
1
Remove warning on web browser upload limit

#256 mcianfrocco closed 3 years ago
1
Create tutorial data and upload steps

#255 mcianfrocco closed 4 years ago
0
Report better error when STAR file path does not match with data upload

#254 mcianfrocco opened 4 years ago
0
slurmstepd: Exceeded job memory limit at some point.

#253 mcianfrocco closed 3 years ago
0