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comprna
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METEORE
Automatic DNA methylation detection from nanopore tools and their consensus model
MIT License
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Installation Error with conflicts
#35
SquRunner
opened
2 months ago
0
Coverage disappears in nanopore segment of tutorial
#34
DKTMPELRN
opened
8 months ago
0
Question: Can the methylation tags of the nanopolish output files be viewed in igv/is there another recommended way to view the methylation tags?
#33
frankmartiniv
opened
1 year ago
0
[BUG] Incorrect score in script/format_megalodon.R
#32
richardstoeckl
closed
1 year ago
1
Question: Can this pipeline be used for bacterial methylation detectin.
#31
martinastoycheva
opened
2 years ago
1
Guppy snakemake rocksdb error
#30
goja288
closed
2 years ago
2
Can Nanopolish snakemake call cpggpc pattern?
#29
kir1to455
closed
2 years ago
1
combination_model_train.py Label and Chr fields
#28
slmcevoy
opened
2 years ago
0
Error in Nanopolish Snakemake
#27
ghost
opened
2 years ago
7
Issue with downloading E.coli Nanopore data
#26
Bessyyi
closed
1 year ago
1
Deepsignal1 snakemake file - error with example data
#25
martinastoycheva
closed
2 years ago
5
Megalodon Example : AssertionError: Alphabet (ACGT) and model number of modified bases (-41) do not agree.
#24
Fatihlrcfs
closed
2 years ago
2
da env
#23
vyx-lucy-kaplun
closed
2 years ago
0
Problem running DeepMod on exmaple data!!!
#22
onkar2470
closed
2 years ago
1
Issue with downloading E.coli Nanopore data
#21
onkar2470
closed
3 years ago
2
memory effeciency of split_cpg_groups.py
#20
shangshanzhizhe
opened
3 years ago
2
Problems running the Nanopolish example: libcrypto.so.1.0.0:
#19
NiRuff
closed
2 years ago
2
How to use `Combined model (multiple linear regression)`
#18
Johnsonzcode
closed
1 year ago
9
It's just those two runs. You'll have to uncompress the .tar.gz file.
#17
Bessyyi
closed
3 years ago
4
Hello,professor！I can't find .fast5 which contained in dataset1&dataset2
#16
Bessyyi
closed
3 years ago
1
Stuck in nanopolish example
#15
Johnsonzcode
closed
3 years ago
2
weighted vs. unweighted average
#14
meydaria
closed
3 years ago
3
combination model
#13
DelphIONe
closed
3 years ago
1
combination_model_train.py doesn't work !
#12
DelphIONe
closed
3 years ago
5
mamba env create guppy doesn't work
#11
DelphIONe
closed
3 years ago
1
tombo snakemake
#10
DelphIONe
closed
3 years ago
3
per-site prediction from combined model format
#9
unnatisonawala
closed
3 years ago
5
module loading error - combination_model_prediction.py
#8
ligiamateiu
closed
3 years ago
4
Nanopolish snakemake pipeline installation error
#7
stlarose
closed
3 years ago
3
segmentation fault while runninc the combination_model_prediction (megalodon - nanopolish)
#6
ligiamateiu
closed
2 years ago
3
guppy snakemake rocksdb error
#5
lixiaopi1985
closed
3 years ago
2
Error in rule calculate_frequency some suggestions
#4
xpli2020
closed
3 years ago
1
Fail with Nanopolish pipeline
#3
lanyelin1123
closed
3 years ago
2
Module Not Found Error: import in call_modification_frequency.py
#2
ViHammer
closed
3 years ago
2
Create LICENSE
#1
EduEyras
closed
4 years ago
0