The package ships with two pdf vignettes.
browseVignettes('protViz')
vignette('protViz')
vignette('PTM_MarkerFinder')
install.packages('protViz')
install the latest development version
install.packages('devtools')
library(devtools)
install_git('https://github.com/cpanse/protViz', build_vignettes = FALSE, quiet = FALSE)
library(protViz)
or
BiocManager::install('cpanse/protViz')
Rcpp::compileAttributes()
tools::package_native_routine_registration_skeleton(".", character_only = FALSE)
RcppExport SEXP _rcpp_module_boot_MyModule();
static const R_CallMethodDef CallEntries[] = {
{"_rcpp_module_boot_MyModule", (DL_FUNC) &_rcpp_module_boot_MyModule, 0},
{NULL, NULL, 0}
};
RcppExport void R_init_minModuleEx(DllInfo *dll) {
R_registerRoutines(dll, NULL, CallEntries, NULL, NULL);
R_useDynamicSymbols(dll, FALSE);
}
docker pull cpanse/protviz \
&& docker run -d -p 8792:8787 cpanse/protviz
connect to http://yourdockerhost:8791 using a web browser
The package ships with a package vignette (browseVignettes('protViz') and a reference manual (just type ?protViz on the R shell).
Both documents are also available on the package's CRAN page.