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cpockrandt
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genmap
GenMap - Fast and Exact Computation of Genome Mappability
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#33
jamesdalg
opened
1 month ago
1
Update README.rst
#32
Creeki
opened
5 months ago
0
out of memmory
#31
guandailu
opened
1 year ago
0
Doesn't build on Apple silicon
#30
gsherloc
opened
1 year ago
0
Genmap map : error E>4 is not supported
#29
ranjit58
opened
1 year ago
0
Finding unique k-mer
#28
yliasolom
opened
1 year ago
0
How do I know about a genome and which other genomes have a common kmer？
#27
bernicegu
opened
2 years ago
0
'map' uses prohibitive amount of memory when K=20
#26
kbchoi
opened
2 years ago
0
Update seqan submodule URL for latest github compliance
#25
remyschwab
closed
2 years ago
1
interpretation of output values
#24
edg1983
opened
2 years ago
1
How we can use genmap scores ?
#23
AstrMary
opened
3 years ago
0
ERROR: Malformed index.info file! Could not find key 'alphabet_size'.
#22
fuesseler
closed
3 years ago
6
How to choose bases to mask
#21
NicMAlexandre
closed
3 years ago
4
cannot find all occuring 4-mer for TCTA on reverse strand given example
#20
thomasvangurp
closed
3 years ago
1
can genmap map run with very large values
#19
splaisan
opened
4 years ago
6
Support compressed fasta files as input for indexing
#18
cpockrandt
opened
4 years ago
3
conda installation fails
#17
lsantuari
closed
4 years ago
4
k(4,1)-mappability for readme example
#16
alexandervogel
closed
4 years ago
1
better explanation of cvs output
#15
duartemolha
closed
4 years ago
5
Using bed file selector -S slows down program by magnitudes
#14
martin-steinegger
closed
4 years ago
3
Add flag to define output name
#13
martin-steinegger
closed
4 years ago
1
Use only name of entry in fasta file for creating index
#12
duartemolha
closed
4 years ago
1
-d or --cvs no output
#11
duartemolha
closed
4 years ago
2
Alt aware mappability?
#10
duartemolha
closed
4 years ago
6
Index genome size limit?
#9
speromelior
closed
4 years ago
4
bed output not zero based
#8
cruckert
closed
5 years ago
2
Computing only binary mappability
#7
joshuak94
opened
5 years ago
4
GenMap getting stuck indexing?
#6
joshuak94
closed
5 years ago
2
Computing the mappability on a subset of the nucleotide data
#5
cpockrandt
closed
4 years ago
1
GenMap 1.0 release
#4
cpockrandt
closed
5 years ago
0
Update index in docs
#3
colindaven
closed
5 years ago
1
small error in indexing example.
#2
joshuak94
closed
5 years ago
0
MapQ?
#1
colindaven
closed
5 years ago
4