dandi dandisets-healthstatus issues

dandi / dandisets-healthstatus

Healthchecks of dandisets and support libraries (pynwb and matnwb)

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Error out the run if found that matlab license has expired

#92 yarikoptic opened 2 months ago
1
Add `-o ro` to davfs mount command

#91 jwodder closed 2 months ago
1
stuck process in D -- I killed davfs2

#90 yarikoptic opened 2 months ago
13
Create a new benchmarking run comparing also with as downloaded (e.g. to drogon, same spindles)

#89 yarikoptic opened 3 months ago
4
Proposal: Separate code from instance-specific scripts & artifacts

#88 jwodder opened 3 months ago
2
Add "test" and "status" to asset entries in `status.yaml` files

#87 jwodder closed 3 months ago
6
Add explicit "status" and "test" to asset records

#86 yarikoptic closed 3 months ago
2
`random-outdated-asset-first` mode: Consider new assets and only consider NWBs

#85 jwodder closed 4 months ago
0
Improve logging

#84 jwodder closed 4 months ago
1
Proposal: Store more information about assets & test runs in `status.yaml`

#83 jwodder closed 3 months ago
1
Proposal: Store a summary of every test run in a dedicated log file

#82 jwodder opened 4 months ago
11
Traverse assets via Archive API

#81 jwodder closed 4 months ago
8
Error out if we fail to kill child test processes

#80 yarikoptic opened 4 months ago
13
investigate/cleanup /tmp/.java_pid* files

#79 yarikoptic closed 4 months ago
3
FOI: I tuned up caching for davfs2

#78 yarikoptic closed 4 months ago
0
Replace datalad-fuse with davfs2

#77 jwodder closed 5 months ago
22
Switch deployment on drogon to use dandidav + davfs2 instead of datalad-fuse

#76 yarikoptic closed 5 months ago
2
Investigate timeouts for a good number of assets

#75 yarikoptic opened 5 months ago
1
Only update public Dandiset datasets

#74 jwodder closed 8 months ago
3
Skip embargoed datasets somehow?

#73 yarikoptic closed 8 months ago
6
Do store/expose logs for (at least failed) runs.

#72 yarikoptic opened 8 months ago
21
Needs to save periodically: run.sh runs for the full run ATM

#71 yarikoptic opened 8 months ago
0
"Inject" state of a dandiset also into a dandiset github repo

#70 yarikoptic opened 9 months ago
0
[gh-actions](deps): Bump codecov/codecov-action from 3 to 4

#69 dependabot[bot] closed 9 months ago
1
Move shell scripts to `tools/`

#68 jwodder closed 9 months ago
5
Add benchmarking of various mounting strategies

#67 jwodder closed 5 months ago
37
MatNWB installation steps still needed?

#65 jwodder closed 4 months ago
3
Compare performance of webdav+davfs2, webdav+webdavfs, and datalad-fuse

#66 jwodder closed 5 months ago
38
Cleanup

#64 jwodder closed 10 months ago
1
Add versions summary to top of README

#63 jwodder closed 11 months ago
2
Add summary over versions of libraries

#62 yarikoptic closed 11 months ago
4
[gh-actions](deps): Bump actions/setup-python from 4 to 5

#61 dependabot[bot] closed 11 months ago
1
Update for Pydantic v2 and anyio v4

#60 jwodder closed 1 year ago
2
Test against Python 3.12

#59 jwodder closed 12 months ago
4
mypy: Set `ignore_missing_imports = False`

#58 jwodder closed 1 year ago
1
[gh-actions](deps): Bump actions/checkout from 3 to 4

#57 dependabot[bot] closed 1 year ago
0
Use Dependabot to update GitHub Actions versions

#56 jwodder closed 1 year ago
0
Log more information about test : versions and code?

#55 yarikoptic closed 4 months ago
0
README.md summary seems to be off for matnwb_nwbRead

#54 yarikoptic closed 1 year ago
0
datalad-fuse via fsspec caching is too slow - needs a solution

#53 yarikoptic closed 4 months ago
4
crashed with "Event loop is closed"

#52 yarikoptic closed 1 year ago
1
Support .zarr testing

#51 yarikoptic opened 1 year ago
0
dandiset id should be forced into str while dumped into yaml

#50 yarikoptic closed 1 year ago
2
test-files: Properly compute asset paths when using `--save-results`

#49 jwodder closed 1 year ago
2
Strip linenos from `versions` dicts when loading

#48 jwodder closed 1 year ago
2
Doesn't actually store updated status for a file while running test-files

#47 yarikoptic closed 1 year ago
0
Stores some `_lineno` within `versions:` record

#46 yarikoptic closed 1 year ago
0
RF: unify into dandisets-healthstatus on CLI and references/name

#45 yarikoptic closed 1 year ago
0
Add `--mode` option

#44 jwodder closed 1 year ago
2
--mode all,random-asset

#43 yarikoptic closed 1 year ago
16