delarosatrevin scipion issues

delarosatrevin / scipion

Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)

http://scipion.cnb.csic.es

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issues

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Allow Advanced to be defined by default

#52 delarosatrevin opened 5 years ago
0
Allow particle subset after Classes consensus

#51 delarosatrevin opened 5 years ago
0
Added threads support in create mask and bug fixed in reconstruct

#50 delarosatrevin closed 5 years ago
0
Relion 3.0 Multibody Protocol Validation Problem

#49 vabrishami opened 5 years ago
0
Sdevel relion3 fixes

#48 delarosatrevin closed 5 years ago
0
New protocls of Relion 3.0 can't be detected (EXCEPT MULTIBODY)

#47 vabrishami closed 5 years ago
8
Jmrt pw refactor - just view diff

#46 delarosatrevin closed 5 years ago
1
Add multi-body refinement

#45 delarosatrevin closed 5 years ago
1
Changes in MetaData to read labels dynamically

#44 delarosatrevin closed 5 years ago
0
relion 3.0, path to binaries

#43 rmarabini opened 5 years ago
1
Add getFinalVolumes to Refine3D protocols

#42 delarosatrevin closed 5 years ago
0
Implementing of Bayesian polishing from Relion3

#41 delarosatrevin closed 5 years ago
1
Review the viewer for Relion3 initial volume protocol.

#40 delarosatrevin opened 5 years ago
0
Implement the wizard for LoG picker

#39 delarosatrevin opened 5 years ago
0
Changes from sdevel-relion3 to smaster (close to v1.2.1)

#38 delarosatrevin closed 5 years ago
0
particles overwritten if input and output has same name in relion.

#37 josuegbl opened 5 years ago
0
Last 1.2.1 release changes to smaster

#36 delarosatrevin closed 5 years ago
0
Can't view imported movies

#35 totalcos closed 5 years ago
0
Fix getJvmMaxMemory returning a string when it should be an int

#34 totalcos closed 5 years ago
1
CTF-refinement protocol from Relion 3

#33 delarosatrevin closed 5 years ago
0
Update Relion Post-processing protocol

#32 delarosatrevin closed 5 years ago
0
Keep log files from Relion motion correction

#31 delarosatrevin closed 5 years ago
0
Add references to Relion 3 paper.

#30 delarosatrevin closed 5 years ago
4
Parse corrected_micrographs.star and add motion values to analyze results columns

#29 delarosatrevin closed 5 years ago
1
Review 2D classification.

#28 delarosatrevin closed 6 years ago
0
Laplacian-of-Gaussian autopicking without references

#27 delarosatrevin closed 5 years ago
1
Relion3: LoG picker:

#26 delarosatrevin closed 6 years ago
0
Relion3: motioncor: Check shifts and how to store them

#25 delarosatrevin closed 5 years ago
0
PluginMeta and co moved to pyworkflow.plugin

#24 pconesa closed 6 years ago
1
Relion3: motioncor: Use gain parameters and test that option.

#23 delarosatrevin closed 5 years ago
0
Relion3: motioncor: parse plots

#22 delarosatrevin closed 6 years ago
0
Relion3: motioncor: add tests

#21 delarosatrevin closed 5 years ago
2
Release 1.2.1 sdevel

#20 delarosatrevin closed 6 years ago
0
Gautomatch: Fix bug of classes starting at 0 in picking (not usable in Relion for particles - sort)

#19 delarosatrevin closed 6 years ago
0
Allow Gautomatch to select a subset for wizard optimization.

#18 delarosatrevin closed 6 years ago
0
Re-factor Gautomatch to use batch steps.

#17 delarosatrevin closed 6 years ago
0
Re-factor Relion picking to use batch steps.

#16 delarosatrevin closed 6 years ago
0
Allow batch picking

#15 delarosatrevin closed 6 years ago
0
More changes (mainly for Streaming and Relion)

#14 delarosatrevin closed 6 years ago
8
Allow Relion classification (2D and 3D) to use references (Avgs or Vols)

#13 delarosatrevin closed 6 years ago
1
Some updates on top of v1.2rc

#12 delarosatrevin closed 6 years ago
3
Extract-movie-particles failed

#11 delarosatrevin closed 7 years ago
0
Scheduling fails when objects has pointers

#10 delarosatrevin closed 7 years ago
0
Add relion-export particles

#9 delarosatrevin closed 6 years ago
1
Improve Classes monitoring for Relion

#8 delarosatrevin closed 7 years ago
0
Improve input selection for Scheduling

#7 delarosatrevin opened 7 years ago
0
Schedule more than one protocol at once

#6 delarosatrevin opened 7 years ago
0
Test scheduling with Cluster and Streaming

#5 delarosatrevin closed 7 years ago
2
Allow selection of missing input for Scheduling

#4 delarosatrevin closed 7 years ago
0
Create a scheduler script for protocols

#3 delarosatrevin closed 7 years ago
0