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delt0r
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msms
A coalsecent simulator with selection
www.mabs.at/ewing/msms
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How build msms from sources?
#55
popgenomics
opened
1 year ago
2
-Sc argument not working as expected
#54
ornobalam
opened
1 year ago
0
Added New Bottleneck Type
#53
swamidass
opened
3 years ago
1
Rounding issue with msms segregating site positions
#52
pandolfa
opened
4 years ago
2
Second example from quickstart page fails
#51
winni2k
opened
4 years ago
1
Support Python 3 as python executable
#50
niemasd
opened
6 years ago
2
how to add instantaneous max lineages event?
#49
swamidass
opened
6 years ago
0
-Smu, -ooC, frequency of introduction
#48
signor-molevol
opened
7 years ago
0
The link is broken
#47
mortonjt
opened
7 years ago
1
-g flag does not work when set before -n flag, problem with example in manual
#46
stephenrong
opened
8 years ago
0
Clarification on local LD and haplotype structure when using the -SI flag
#45
ghost
opened
8 years ago
0
Is there any way to increase the precision of position floats?
#44
stephenrong
opened
8 years ago
0
Problem with frequency trajectory when simulating with large adaptive theta and small selection coefficint
#43
ngarud
opened
8 years ago
0
Problems reading in frequency trace
#42
meikew
opened
8 years ago
0
Unexpected behavior with -es and selection
#41
BenjaminPeter
opened
9 years ago
2
Using -SI at time 0 produces NullPointerException
#40
paulstaab
opened
9 years ago
2
Multiple gene trees outputted
#39
ksiewert
opened
9 years ago
0
Origin Count dependent on time when selection starts
#38
ksiewert
closed
9 years ago
1
Strange output when using -Smark and -SI together
#37
ksiewert
closed
10 years ago
1
Questions on -SI, -Sc with -oOC
#36
szpiech
opened
10 years ago
0
Example from manual fails
#35
szpiech
closed
10 years ago
1
Unexpected non-binary allelic state at selected locus
#34
ghost
closed
10 years ago
2
-Strace option gives exception
#33
ngarud
opened
10 years ago
1
Difficulty with msms result when using reduced subpopulation size
#32
StevenVB12
closed
10 years ago
3
Time sampled data 2
#31
lormond
opened
10 years ago
0
Beneficial allele gets lost although -SFC is set
#30
ChristianHuber
closed
10 years ago
1
Problems simulating selection in different demes and at different times using an admixture model
#29
ngarud
closed
10 years ago
1
Statistics and Selection
#28
Mcroze
closed
10 years ago
0
Variants arise at same position as selected site... -Smark issue?
#27
leslem
closed
10 years ago
1
-ej events disturb starting frequency set by -SI ... -Smark issue?
#26
leslem
closed
10 years ago
1
Smark clarification
#25
leslem
closed
10 years ago
1
Processing of trace file with -Strace option
#24
alexnater
closed
10 years ago
0
Smark occasionally wrong
#23
ChristianHuber
opened
11 years ago
3
Time sampled data
#22
lormond
opened
11 years ago
2
-oOC outputs numbers larger than the sample size
#21
paula-tataru
opened
11 years ago
1
Exception when using -Strace
#20
paula-tataru
opened
11 years ago
2
Compatibility with ms output
#19
paula-tataru
closed
11 years ago
1
Branch length precision
#18
paula-tataru
closed
11 years ago
3
build 92 and java 6
#17
leslem
closed
11 years ago
5
multiple alleles at non-selected site
#16
leslem
closed
11 years ago
4
Choose island on which beneficial mutation arises using the -SF option
#15
kuylakop
closed
11 years ago
0
Issues with complex demography and old selection events
#14
annaferrer
closed
11 years ago
4
-Strace exceptions
#13
szpiech
closed
11 years ago
2
Problem simulating selection with the -es and -ej options used in constructing the demography
#12
ngarud
closed
11 years ago
2
java.lang.ArrayIndexOutOfBoundsException when use -Sc
#11
wavefancy
closed
11 years ago
3
Something wrong for -Sc
#10
wavefancy
closed
11 years ago
0
out of memory using -oTrace option
#9
ngarud
closed
11 years ago
1
Problems with selection before a population split (forward in time)
#8
ChristianHuber
closed
11 years ago
3
Apply -stat to SNP data
#7
grillino
closed
11 years ago
1
Trying to output allele frequency trajectory in a multi-deme model
#6
ngarud
closed
11 years ago
2
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