issues
search
denisekuehnert
/
bdmm
Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data
http://mbe.oxfordjournals.org/content/early/2016/05/20/molbev.msw064
GNU General Public License v3.0
4
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
BEAUti templates not loading
#37
rbouckaert
opened
1 year ago
0
Added missing operators to beauti templates.
#36
tgvaughan
opened
1 year ago
0
Problem with substitution model parameters in BEAUti 2.7.4
#35
EtthelWindels
opened
1 year ago
0
bdmm port to beast 2.7
#34
jordandouglas
closed
1 year ago
0
Start likelihood:-Infinity after 50 initialisation attempts
#33
Omnipotent32
opened
3 years ago
2
BEAUTi not correctly setting priors bounds
#32
esteinig
closed
4 years ago
1
Set up xml : state changes occuring at transmission times
#31
PegahDan
closed
4 years ago
1
Added class to define TraitSets using general node metadata.
#30
tgvaughan
closed
5 years ago
0
Added root type probability logger for BDMMUC.
#29
tgvaughan
closed
5 years ago
0
Allowed node state assignment from string metadata.
#28
tgvaughan
closed
5 years ago
0
BEAUti not correctly adjust dimensions
#27
carlopacioni
opened
5 years ago
1
template have no aux-entries
#26
rbouckaert
closed
5 years ago
1
add DOI to citation
#25
walterxie
closed
6 years ago
1
Added BEAUti template for tip-typed analyses
#24
tgvaughan
closed
6 years ago
0
changed birthRate and deathRate to Functions
#23
alexeid
closed
6 years ago
0
Updated version and build.xml
#22
tgvaughan
closed
6 years ago
0
Completed updating BEAUti template for BEAST 2.5
#21
tgvaughan
closed
6 years ago
0
Working on BEAST 2.5 + MTT 7 BEAUti compatibility
#20
tgvaughan
closed
6 years ago
0
BEAUti template incompatible with BEAST 2.5
#19
tgvaughan
closed
6 years ago
2
Fixed handling of thread pool for parallelization
#18
jscire
closed
6 years ago
0
How is this package licensed?
#17
tgvaughan
closed
6 years ago
0
Important bug correction
#16
jscire
closed
6 years ago
0
Fixed bug with MCMC not starting with coloured trees when using multi…
#15
jscire
closed
6 years ago
0
Temporary fix on multithreaded calculation issue
#14
jscire
closed
6 years ago
0
Parallel calculations and code refactoring
#13
jscire
closed
6 years ago
0
Small fix: ambiguity on inputs
#12
jscire
closed
6 years ago
0
Partial clean-up and bug fixes
#11
jscire
closed
7 years ago
0
Speed improvement + multi-rho sampling
#10
jscire
closed
7 years ago
0
Speed improvements + multi-rho sampling
#9
jscire
closed
7 years ago
0
Efficiency improvement for uncoloured trees
#8
jscire
closed
7 years ago
0
Faster calculations for p0 equations
#7
jscire
closed
7 years ago
0
Added adaptive integrator
#6
jscire
closed
8 years ago
0
Added SmallNumbers implementation
#5
jscire
closed
8 years ago
0
Ratio parametrisation likelihood test added
#4
junniest
closed
8 years ago
0
Added R0 ratio parametrisation
#3
junniest
closed
8 years ago
0
Some minor changes relating to integrators and simulated data analyses.
#2
tgvaughan
closed
8 years ago
0
New migration model
#1
tgvaughan
closed
9 years ago
0