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dib-lab / genome-grist

map Illumina metagenomes to genomes!
https://dib-lab.github.io/genome-grist/
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genome-grist README

PyPI

License: 3-Clause BSD

genome-grist analyzes the strain composition of microbial metagenomes using minimum metagenome covers and produces a variety of compositional and taxonomic summaries.

Check out the quick start! And please also see the rest of the docs for more information!

Example: the strain composition of a gut microbiome (iHMP)

This figure was autogenerated by genome-grist.

an example image made with genome-grist

CTB 01/22