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dieterich-lab
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nmdtxdb
Shiny application and code for the database for NMD targets
https://shiny.dieterichlab.org/app/NMDtxDB
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Box plots for transcripts are not aligned with the table.
#31
tbrittoborges
closed
7 months ago
1
Reduce dotplot by only showing the intersection of entries with CDS and tested for DTE
#30
tbrittoborges
closed
7 months ago
0
Gene card error for U2AF1
#29
tbrittoborges
closed
7 months ago
0
Issues with Renv, Docker and app deployment.
#28
tbrittoborges
opened
7 months ago
0
Feat new tx structure
#27
tbrittoborges
closed
8 months ago
0
Table and dotplot downloads need some testing
#26
tbrittoborges
closed
8 months ago
1
There are contrasts that seem duplicated because they are missing cell clone
#25
tbrittoborges
closed
8 months ago
0
Fix trim of the dotoplot legend
#24
tbrittoborges
closed
8 months ago
0
Fix timeout on selectize: why this is not working?
#23
tbrittoborges
closed
8 months ago
1
TODOs from 2023.11.15
#22
tbrittoborges
closed
7 months ago
0
Criu deploy
#21
tbrittoborges
closed
9 months ago
0
BAG4 shows openprot CDS source but does not list any entries
#20
tbrittoborges
closed
8 months ago
0
Add pseudo-counts to padj so it can compute point size
#19
tbrittoborges
closed
11 months ago
0
Detail PTC rule for MSTRG14327.3_1 FSD1
#18
tbrittoborges
closed
7 months ago
1
Make the color bar not symmetrical
#17
tbrittoborges
closed
11 months ago
0
Would it be possible to clean the gene Selectize without deleting?
#16
tbrittoborges
closed
11 months ago
1
Problematic ORF for BAG3
#15
CDieterich
closed
8 months ago
0
Replace busy heatmaps (like PUM2) with download btns
#14
tbrittoborges
closed
11 months ago
0
Download for images and tables
#13
tbrittoborges
closed
7 months ago
1
Tutorial implementation
#12
tbrittoborges
closed
7 months ago
1
Heatmap in case of multiple contrasts
#11
CDieterich
closed
7 months ago
5
Logo / favicon icon
#10
tbrittoborges
closed
11 months ago
1
Missing trackhub link for transcripts
#9
tbrittoborges
closed
12 months ago
0
Some of the annotation is still wrong
#8
CDieterich
closed
11 months ago
1
The ORF source should be shown in the figure
#7
CDieterich
closed
11 months ago
1
identical labels in contrast tab
#6
CDieterich
closed
12 months ago
0
Improve app responsiveness - use CRIU for the R process
#5
tbrittoborges
closed
7 months ago
11
Improve database responsiveness - use indexes.
#4
tbrittoborges
closed
1 year ago
2
Improved advanced view
#3
tbrittoborges
closed
11 months ago
1
Expanding dataset
#2
tbrittoborges
opened
1 year ago
1
Users should be able to filter datasets
#1
tbrittoborges
closed
1 year ago
1