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dkoslicki
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NCATS
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Geneprof 500 response
#134
erikyao
closed
6 years ago
1
add ChEMBL drug->target probability scores for target predictions to the KG
#133
saramsey
closed
6 years ago
1
add MeSH definitions into the knowledge graph
#132
saramsey
closed
6 years ago
1
regression test suite
#131
saramsey
opened
6 years ago
1
update BuildMasterKG.py to seed all FDA-approved drugs
#130
saramsey
closed
6 years ago
0
404 error in BuildMasterKG.get_curie_ont_ids_for_mesh_term
#129
saramsey
closed
6 years ago
0
Connection issue for Neo4j on ncats.saramsey.org
#128
saramsey
closed
6 years ago
1
Write command-line script for PubMed NGD semantic distance calculation
#127
saramsey
closed
6 years ago
0
Write QueryJASPAR class to query JASPAR's REST API
#126
saramsey
closed
6 years ago
1
JSON issue with null result from Q1
#125
saramsey
closed
6 years ago
4
for JSON output from Q1Solution, add "text" field with human-readable text
#124
saramsey
closed
6 years ago
3
http://ncats.saramsey.org/doc/RTX/index.html returns 404
#123
erikyao
closed
6 years ago
6
add JSON output format as a command-line option in Q1Solution.py
#122
saramsey
closed
6 years ago
0
Orangeboard.py not closing Neo4j session
#121
saramsey
closed
6 years ago
0
Error when calling QXSolution -h, X=1,2
#120
dkoslicki
closed
6 years ago
3
Configure lysine.ncats.io Neo4j instance to be read-only
#119
saramsey
closed
6 years ago
1
write howto on deploying RTX POC via docker
#118
saramsey
closed
6 years ago
1
change "pharos_drug" to "drug" in BioNetExpander, BuildMasterKG, and Q2Utils.py
#117
saramsey
closed
6 years ago
1
Web service should return reusable (structured) results
#116
edeutsch
closed
6 years ago
5
Add code for Timeout handling to QueryReactome
#115
saramsey
closed
6 years ago
1
Test out WebEx logistics from Bexell 211
#114
saramsey
closed
6 years ago
8
Readme in UI directory
#113
dkoslicki
closed
6 years ago
1
API caching for Q1 and Q2?
#112
dkoslicki
closed
6 years ago
8
Catching NCBI eUtils timeout
#111
dkoslicki
closed
6 years ago
5
Increase font size for question box
#110
arnabdotorg
closed
6 years ago
0
Full results not printing
#109
dkoslicki
closed
6 years ago
0
-Inf in Q2Solution.py confidence
#108
dkoslicki
closed
6 years ago
2
Check results of Q2Solution.py
#107
dkoslicki
closed
6 years ago
2
disease/drug not in Q2 list
#106
dkoslicki
closed
6 years ago
0
Q2 multi-word diseases
#105
dkoslicki
closed
6 years ago
3
Duplicate PC2 protein-protein interaction edges in the KG when exported to CSV
#104
saramsey
closed
6 years ago
3
password-protect TCP port 80 access on lysine.ncats.io and ncats.saramsey.org
#103
saramsey
closed
6 years ago
1
only 656 out of 1000 drugs are mapped to a target protein
#102
saramsey
closed
6 years ago
3
Look into Cy2neo for neo4j visualization
#101
saramsey
opened
6 years ago
3
put MIT LICENSE file in the code directory
#100
saramsey
closed
6 years ago
0
Normalized Google Distance matrix based on PubMed abstract full-text search (Q1)
#99
saramsey
closed
6 years ago
1
Random Walk with Restart development
#98
saramsey
closed
6 years ago
3
Easy-to-implement suggestions for the web UI
#97
saramsey
closed
6 years ago
0
test Q1 command-line-interface script
#96
saramsey
closed
6 years ago
0
test the proof-of-concept OpenAPI interface for RTX
#95
saramsey
closed
6 years ago
3
Please help review the Google Slides presentation on Tuesday 11/28
#94
saramsey
closed
6 years ago
1
Make HTML mockup showing PubMed literature co-occurrence analysis
#93
saramsey
closed
6 years ago
1
check q2-drugandcondition-list-mapped.txt into GitHub to Q2 tool can use it
#92
saramsey
closed
6 years ago
1
How many drugs in our KG are connected to proteins?
#91
saramsey
closed
6 years ago
1
Backup SQLite cache, neo4j database, and docker image to S3
#90
saramsey
closed
6 years ago
2
Need a script to dump Neo4j database to CSV/TSV
#89
saramsey
closed
6 years ago
0
[LOWPRI] Why is Orangeboard executing Cypher statements in a transaction?
#88
saramsey
opened
6 years ago
28
make Neo4j database on lysine read-only
#87
saramsey
closed
6 years ago
1
make the number of expansions in BuildMasterKG.seed_and_expand_kg_q1[q2] configurable
#86
saramsey
closed
6 years ago
0
add HTTP caching to Q1Solution.py
#85
saramsey
closed
6 years ago
1
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