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dr-joe-wirth
/
primerForge
software to identify primers that can distinguish genomes
Apache License 2.0
11
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4
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python 3.12 pip install error
#26
mbhall88
opened
5 hours ago
0
`Parameters` should be pickled to improve checkpointing stability
#25
dr-joe-wirth
opened
15 hours ago
0
Relation to swga
#24
mbhall88
opened
2 weeks ago
0
Estimated resource requirement
#23
mbhall88
closed
8 hours ago
8
Add a contributing document
#22
mbhall88
opened
3 weeks ago
0
How to run tests
#21
mbhall88
closed
2 weeks ago
3
Failed manual installation
#20
mbhall88
closed
2 weeks ago
3
add validation step using isPCR
#19
dr-joe-wirth
opened
2 months ago
0
search for primers for sequence-based diagnostics
#18
dr-joe-wirth
opened
2 months ago
0
Update paper.md
#17
jchen232
closed
2 months ago
0
Update paper.md
#16
lskatz
closed
2 months ago
0
the result of primerForge
#15
aiqubo
closed
2 months ago
3
BED output files
#14
lskatz
opened
4 months ago
2
Added basic CI testing
#13
lskatz
closed
4 months ago
0
installation and usage doc
#12
lskatz
closed
4 months ago
0
add analysis workflow
#11
dr-joe-wirth
closed
3 months ago
0
move `_printStart` and `_printEnd` functions into `Clock` class as methods.
#10
dr-joe-wirth
closed
4 months ago
0
move logging out of debug mode; add checkpointing
#9
dr-joe-wirth
closed
3 months ago
0
predict and filter out pairs that form primer dimers
#8
dr-joe-wirth
closed
4 months ago
0
allow circular genomes (wrap-around product finding)
#7
dr-joe-wirth
opened
4 months ago
0
create `pip` installation
#6
dr-joe-wirth
closed
3 months ago
3
create `bioconda` installation
#5
dr-joe-wirth
closed
2 months ago
1
create Docker container
#4
dr-joe-wirth
closed
4 months ago
0
add unit tests
#3
dr-joe-wirth
closed
4 months ago
0
create a wiki
#2
dr-joe-wirth
opened
5 months ago
1
write a readme
#1
dr-joe-wirth
closed
3 months ago
1