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dyollb
/
segmantic
Semantic segmentation and image-to-image translation based on AI
https://dyollb.github.io/segmantic/
MIT License
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✨♻️ refactor preprocessing
#64
dyollb
opened
5 months ago
1
✨Fully support decathlon datalist
#63
dyollb
closed
6 months ago
1
♻️ update hooks, add ruff, add py11 support
#62
dyollb
closed
1 year ago
1
🐛 Fix Dataset/input-output dir conflict
#61
Konohana0608
closed
1 year ago
2
BUG: remove image_dir/label_dir from config in cross-validate
#60
dyollb
closed
1 year ago
1
BUG: should be dumps = partial(config.dumps, is_json=is_json)
#59
dyollb
closed
1 year ago
1
Add boundary loss
#58
dyollb
opened
1 year ago
0
✨🔨 add distance transform
#57
dyollb
opened
1 year ago
1
⬆️add py310 in ci
#56
dyollb
closed
1 year ago
1
💦 refine select best ensemble
#55
dyollb
closed
1 year ago
1
✨⚗️Implement ensemble
#54
Konohana0608
closed
1 year ago
2
♻️ Replace ITK code by SimpleITK
#53
dyollb
closed
1 year ago
1
move pyright config to pyproject.toml
#52
dyollb
opened
1 year ago
0
🐛 use monai DataLoader
#51
dyollb
closed
1 year ago
1
Replace ITK by SimpleITK for image processing functions
#50
dyollb
closed
1 year ago
0
Add iSEG export to save image and segmentation as iSEG file
#49
dyollb
closed
1 year ago
0
Add landmark detection
#48
dyollb
opened
2 years ago
0
✨ add landmark detection
#47
dyollb
closed
1 year ago
1
✨added cross-validation capabilities
#46
Konohana0608
closed
2 years ago
3
📝 inform gh which syntax highlighting to use
#45
dyollb
closed
2 years ago
0
✨ add script to extract surfaces from labels
#44
dyollb
closed
2 years ago
1
✨add n4 bias correction, ⚗️ add draft nyul normalizer
#43
dyollb
closed
2 years ago
1
🚑️ fix RandCropByLabelClasses args
#42
dyollb
closed
2 years ago
1
♻️ additional mypy warnings
#41
dyollb
closed
2 years ago
1
Extend PairedDataset to read keys from dataset.json
#40
dyollb
opened
2 years ago
0
Test unet workflow on pull request
#39
dyollb
opened
2 years ago
0
🐛fix predict, minor clean-up evaluation
#38
dyollb
closed
2 years ago
1
⬆️ Upgrade hooks
#37
dyollb
closed
2 years ago
4
⚗️✨♻️ Support bundled transforms
#36
dyollb
closed
2 years ago
2
🐛 fix intensity augmentation training
#35
dyollb
closed
2 years ago
0
use bundle approach to make pre-processing transforms flexible
#34
dyollb
opened
2 years ago
0
predict: evaluation should produce average/aggregate metrics
#33
dyollb
opened
2 years ago
0
🐛 fix predict
#32
dyollb
closed
2 years ago
0
Use YML instead (or in addition to) to JSON for config files
#31
dyollb
closed
2 years ago
1
Register script command lines as entry_points
#30
dyollb
opened
2 years ago
0
Add option to run k-fold cross-validation
#29
dyollb
closed
2 years ago
1
✨ ♻️ Improved dataset
#28
dyollb
closed
2 years ago
0
fix: PairedDataSet assumed pairs had exactly the same filename
#27
dyollb
closed
2 years ago
0
🐛 fix type comparison for casting to path
#26
dyollb
closed
2 years ago
0
⬆️ fix vulnerability
#25
dyollb
closed
2 years ago
0
🐛fix requirements
#24
dyollb
closed
2 years ago
0
🐛 fix docs requirements
#23
dyollb
closed
2 years ago
0
💄upgrade pytorch, torch-lightning and cp10 CI
#22
dyollb
closed
2 years ago
1
✨Nd cyclegan
#21
dyollb
opened
2 years ago
0
🐛: ensure we have at least one validation dataset
#20
dyollb
closed
2 years ago
0
♻️ add test for print-defaults, move typer app to segmantic.commands
#19
dyollb
closed
2 years ago
0
✨ add load_from_checkpoint and augmentation
#18
dyollb
closed
2 years ago
0
🐛 load legacy settings only if the file exists
#17
dyollb
closed
2 years ago
0
✨ expose cache rate
#16
dyollb
closed
2 years ago
0
✨use cmap from tissue list
#15
dyollb
closed
2 years ago
0
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