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ebi-ait
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ingest-graph-validator
HCA Ingest Service Graph Validation Suite
MIT License
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Merging dev to master
#85
ESapenaVentura
closed
11 months ago
0
Fixed bug where analysis_files were not being caught. Improved message
#84
ESapenaVentura
closed
11 months ago
1
2022-04-25: Modify no_orphaned.adoc to capture orphaned biomaterials
#83
ESapenaVentura
opened
1 year ago
0
changed __patch_entity function
#82
ESapenaVentura
closed
1 year ago
0
dcp-925 large dataset crashes graph validation: run tests on gitlab
#81
amnonkhen
closed
1 year ago
0
dcp-925 graph validation scalability
#80
amnonkhen
closed
1 year ago
0
dcp-925 graph validation scalability
#79
amnonkhen
closed
1 year ago
0
dcp-925 large dataset crashes graph validation
#78
amnonkhen
closed
1 year ago
3
Improve smartSeq2 test
#77
idazucchi
closed
1 year ago
1
Update xls_hydrator.py
#76
Wkt8
closed
1 year ago
0
add validation: cell suspensions linked to files
#75
idazucchi
opened
2 years ago
0
Deleted test for hsadvp. Need broader terms for GDPR
#74
ESapenaVentura
closed
2 years ago
0
update docs changes from master
#73
amnonkhen
closed
2 years ago
0
Hydrate from all submissions in project
#72
jacobwindsor
closed
2 years ago
1
validation for process completeness
#71
idazucchi
opened
2 years ago
2
Added test for value-unit association
#70
ESapenaVentura
opened
2 years ago
1
20220207: Unit comes with a value associated
#69
ESapenaVentura
opened
2 years ago
2
[dcp-551] Remove app from PyPi
#68
ke4
closed
2 years ago
1
Merge pull request #66 from ebi-ait/wkt-issue-626
#67
Wkt8
closed
2 years ago
1
Wkt issue 626
#66
Wkt8
closed
2 years ago
0
Revert "Updated sequence_file_linkto_cell_suspesion.adoc"
#65
Wkt8
closed
2 years ago
0
Updated sequence_file_linkto_cell_suspesion.adoc
#64
Wkt8
closed
2 years ago
0
Modified test to not capture single-end SS2. Fixes #62
#63
ESapenaVentura
closed
2 years ago
0
Improve smartseq2_has_2-3_files to allow 1 fastq if the sequencing is single ended
#62
idazucchi
closed
2 years ago
1
Don't make the metadata documents invalid
#61
jacobwindsor
closed
2 years ago
0
Use new submission states
#60
jacobwindsor
closed
2 years ago
0
Improved tests. Fixes #57 and #58
#59
ESapenaVentura
closed
2 years ago
0
Improve smart-seq 2 test to catch only sequence files
#58
ESapenaVentura
closed
2 years ago
0
Remove or change contains_cell_barcode_info.adoc test
#57
willrockout
closed
2 years ago
1
Corrected test to sum null values
#56
ESapenaVentura
closed
2 years ago
1
Updates tests
#55
ESapenaVentura
closed
3 years ago
0
Added exception for supplementary files. Fixes #53
#54
ESapenaVentura
closed
3 years ago
0
Improve no_orphans.adoc so that ignores supplementary files
#53
idazucchi
closed
3 years ago
0
Make try catches safer
#52
jacobwindsor
closed
3 years ago
0
Deleted UMI barcode test. Fixes #49 and #50 .
#51
ESapenaVentura
closed
3 years ago
0
Graph validator - Error in files with two library preparation protocols associated
#50
ipediez
closed
2 years ago
2
Graph validator requires UMI barcodes for scATAC-seq libraries
#49
rachadele
closed
3 years ago
0
Update installation and running instructions
#48
jacobwindsor
closed
3 years ago
0
Update graphValidationErrors on entity causing the issue
#47
jacobwindsor
closed
3 years ago
0
Deleted submission UUIDs from templates and script
#46
ESapenaVentura
opened
3 years ago
1
Make error messages more helpful
#45
jacobwindsor
closed
3 years ago
1
2021/11/16: hsapdv_is_used_for_humans
#44
ESapenaVentura
closed
3 years ago
1
Listen to queue
#43
jacobwindsor
closed
3 years ago
1
Error messaging in ingest
#42
jacobwindsor
closed
3 years ago
0
Update ingest when graph validation ran
#41
jacobwindsor
closed
3 years ago
0
Fixed analysis file picking, improved return
#40
ESapenaVentura
closed
3 years ago
0
18102021 - Ensure paired_end_2_files.adoc only runs for raw files
#39
ESapenaVentura
closed
3 years ago
0
[BUG] Fix 10x test
#38
ESapenaVentura
closed
3 years ago
1
Create tests to ensure project level information roughly match info in entities
#37
ESapenaVentura
closed
3 years ago
1
Added new test to ensure uniqueness within a library prep + lane index
#36
ESapenaVentura
closed
3 years ago
3
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