ekg seqwish issues - Githubissues

ekg / seqwish

alignment to variation graph inducer

MIT License

143 stars 18 forks source link

issues

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automatically use the GFA output file as the work basename

#26 ekg closed 5 years ago
0
iitii everywhere

#25 ekg closed 5 years ago
0
Assertion `seen_bp == accumulated_bp' failed.

#24 ChriKub closed 5 years ago
3
Iitreeitall: implement seqwish using only implicit interval trees

#23 ekg closed 5 years ago
0
seqwish should clean up after itself

#22 ekg opened 5 years ago
0
resolve path corruption and always validate paths

#21 ekg closed 5 years ago
0
path length changes in graph construction

#20 ChriKub closed 5 years ago
8
Option for acyclic reference path

#19 glennhickey closed 5 years ago
5
seqwish crashes on chrom21 for 3 hgsvc samples

#18 glennhickey opened 5 years ago
4
bsort bad link

#17 bh9 opened 5 years ago
1
reducing local graph complexity

#16 ekg closed 4 years ago
6
Added Dockerfile

#15 alancleary closed 5 years ago
1
use in-place parallel super scalar samplesort

#14 ekg closed 5 years ago
1
reducing memory usage further

#13 ekg opened 5 years ago
0
white space after path names

#12 ekg closed 5 years ago
2
softmasked bases

#11 ekg opened 5 years ago
0
"OM" not valid cigar

#10 apregier opened 5 years ago
0
seqwish to vg

#9 fbemm opened 5 years ago
4
I would like to build seqwish

#8 SilasK closed 4 years ago
5
Consistent segfaults when running seqwish

#7 apregier opened 5 years ago
6
notes on random seqfaults on AMD64 with GCC 5.4

#6 ekg opened 5 years ago
0
seqwish is not threadsafe

#5 ekg closed 6 years ago
3
"Missing" edges

#4 fbemm closed 5 years ago
11
mmap'ed reads of dmultimap

#3 ekg opened 6 years ago
0
Fix order of CMake statements

#2 apregier closed 6 years ago
0
Assertion `occs.size() == 1' failed

#1 fbemm closed 6 years ago
8