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emyounglab
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prymetime
Pipeline for Recombinant Yeast genoMEs That Identifies Markers of Engineering
MIT License
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-ref_genome flag unused?
#42
lschaerfen
closed
2 months ago
1
Sample does not exist
#41
yustinus1
opened
5 months ago
1
Python incompatibility issue between Medaka and Protobuf due to new releases
#40
DaneJacobson
closed
1 year ago
0
Resolving Python compatibility issues in Dockerfile
#39
DaneJacobson
closed
1 year ago
0
Error: Invalid or Corrupt Jarfile
#38
evautumn
closed
1 year ago
0
Is it possible to use fasta files instead of fastq files for illumina reads?
#37
evautumn
closed
1 year ago
0
Format of genome_size input?
#36
evautumn
closed
2 years ago
1
What is eng_sig?
#35
evautumn
closed
2 years ago
1
Merge BBN bowtie2 branch
#34
tyler-e-marshall
closed
2 years ago
0
Update split.sh
#33
sjtrauber
closed
2 years ago
0
Update unicycler.sh
#32
sjtrauber
closed
2 years ago
0
Update PRYMETIME.sh
#31
sjtrauber
closed
2 years ago
0
Update nucmer4.py
#30
sjtrauber
closed
2 years ago
0
Update Dockerfile
#29
sjtrauber
closed
2 years ago
0
Modified Dockerfile so project would build
#28
matthewstuartedwards
closed
2 years ago
0
circular contig excluded if unicycler fails
#27
emyounglab
closed
2 years ago
0
Failure if only circular contigs from flye
#26
emyounglab
closed
2 years ago
0
Genotype strain
#25
emyounglab
opened
3 years ago
0
Update unicycler.sh
#24
emyounglab
closed
2 years ago
0
recent versions of medaka fail to build
#23
emyounglab
closed
2 years ago
0
Create eng_sig_cmap.R
#22
emyounglab
closed
3 years ago
0
Create eng_sig_cmap.sh
#21
emyounglab
closed
3 years ago
0
Create alitv.yml
#20
emyounglab
closed
3 years ago
0
Create eng_sig_alitv.sh
#19
emyounglab
closed
3 years ago
0
Update and rename sorter.py to sorter2.py
#18
emyounglab
closed
3 years ago
0
Update and rename sorter.sh to sorter2.sh
#17
emyounglab
closed
3 years ago
0
Create eng_sig_genome.sh
#16
emyounglab
closed
3 years ago
0
Update flye.sh
#15
emyounglab
closed
3 years ago
0
Update PRYMETIME.sh
#14
emyounglab
closed
3 years ago
0
Update Dockerfile
#13
emyounglab
closed
3 years ago
0
Update eng_sig scripts for the docker environment
#12
tcmitchell
closed
4 years ago
0
Make ENG_SIG work optional
#11
tcmitchell
closed
4 years ago
0
Add software dependencies to docker image
#10
tcmitchell
closed
4 years ago
0
Update Dockerfile
#9
emyounglab
closed
4 years ago
0
bcftools not found to run medaka
#8
emyounglab
closed
4 years ago
1
Update PRYMETIME.sh
#7
emyounglab
closed
4 years ago
0
Create eng_sig_felix.fasta
#6
emyounglab
closed
4 years ago
0
Create eng_sig_figure.R
#5
emyounglab
closed
4 years ago
0
Create eng_sig_figure.sh
#4
emyounglab
closed
4 years ago
0
Create blastn_parse.pl
#3
emyounglab
closed
4 years ago
0
Create eng_sig_blast.sh
#2
emyounglab
closed
4 years ago
0
Update unicycler.sh
#1
emyounglab
closed
4 years ago
0