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wf-somatic-variation
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Error executing process > 'ingress_tumor:checkBamHeaders (1)'
#29
Manoswini-02
opened
2 days ago
0
Regression in annotate_sv: error caused by END<POS
#28
TBradley27
opened
1 week ago
1
Error executing process > 'mod:dss'
#27
SilviaMariaMacri
opened
1 week ago
6
Error executing process > 'ingress_normal:checkBamHeaders (1)'
#26
SilviaMariaMacri
opened
2 weeks ago
10
Problem with data containing reads basecalled with more than one basecaller model
#25
alexcoppe
closed
2 weeks ago
3
non-matched sample_name, tumour_bam and normal_bam from the html report
#24
selmapichot
opened
3 weeks ago
15
non-matched sample_name, tumour_bam and normal_bam from the html report
#23
selmapichot
closed
3 weeks ago
1
Error when emitting versions and parameters for main.nf
#22
TBradley27
closed
3 weeks ago
2
Cannot read project manifest -- Cause: Remote resource not found
#21
selmapichot
closed
1 month ago
1
SNP: low quality score filtering
#20
selmapichot
closed
2 months ago
1
error exit code 1
#19
selmapichot
closed
2 months ago
1
copy of the reference genome with the output files
#18
selmapichot
closed
2 months ago
4
Error in snv:clairs_predict_pileup_indel
#17
alexcoppe
opened
2 months ago
12
New HAC basecalling model data not compatible with the pipeline
#16
TBradley27
closed
6 days ago
12
Multiple inputs/design for mod
#15
umranyaman
closed
2 months ago
1
error trying to run on HPC
#14
Jane-Gibson
closed
1 month ago
2
Packages not found on Debian HPC
#13
umranyaman
closed
2 months ago
13
There are multiple input files for each of the following file names: OPTIONAL_FILE
#12
ChristopherRichie
closed
8 months ago
4
Are there any future plans for a CNV module?
#11
TBradley27
opened
9 months ago
1
aligned or unaligned bam files?
#10
nnneeennn
closed
9 months ago
4
Output files/folder structure
#9
myxotheles
closed
9 months ago
2
Error while running the wf
#8
assafgrw
closed
8 months ago
11
Default memory and time allocations for processes is too low
#7
TBradley27
closed
10 months ago
1
Can input be CRAM
#6
kiranpatil222
closed
10 months ago
1
Can this wf-somatic works on PacBio data ( Tumor/Normal BAM input)
#5
kiranpatil222
closed
10 months ago
1
non-human reference genomes
#4
ChristopherRichie
closed
10 months ago
4
[Bug]: Error executing process > 'alignment_stats:makeQCreport (1)
#3
myxotheles
closed
1 year ago
2
[Bug]: TypeError: 'NoneType' object is not subscriptable
#2
myxotheles
closed
10 months ago
4
The requested image's platform (linux/amd64) does not match the detected host platform (linux/arm64/v8) and no specific platform was requested
#1
myxotheles
closed
10 months ago
4