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epiforecasts
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EpiSoon
Forecasting the effective reproduction number over short timescales
https://epiforecasts.io/EpiSoon/
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Fix cases
#41
seabbs
closed
4 years ago
0
fix overspill
#40
seabbs
closed
4 years ago
0
example in `compare_models` returns an error
#39
tuxette
closed
4 years ago
1
Add citation info using Zenodo DOIs
#38
seabbs
closed
4 years ago
0
Add Zenodo
#37
seabbs
closed
4 years ago
0
Improve scoring
#36
seabbs
closed
4 years ago
0
Track model failures
#35
seabbs
opened
4 years ago
0
bsts AR 3 model produces different numbers of samples than other models
#34
nikosbosse
closed
4 years ago
9
optim for sampling
#33
seabbs
closed
4 years ago
0
Further fable changes
#32
seabbs
closed
4 years ago
0
Maybe Find Alternative to Nested Function Call for Model
#31
nikosbosse
closed
4 years ago
3
Generalise to other packages
#30
seabbs
closed
4 years ago
0
Debug optim
#29
seabbs
closed
4 years ago
0
Warning of potential issue in predict cases
#28
seabbs
closed
4 years ago
0
Make compare_timeseries be more efficient
#27
seabbs
closed
4 years ago
1
Readme to vignette
#26
seabbs
closed
4 years ago
0
Check iterative fitting to make sure working as intended
#25
seabbs
closed
4 years ago
1
Add tests based on package examples
#24
seabbs
closed
4 years ago
0
Port readme content into vignette and expand
#23
seabbs
closed
4 years ago
1
Improve plotting of observed cases
#22
seabbs
closed
4 years ago
1
Review
#21
seabbs
closed
4 years ago
0
Error for compare_timeseries: Element 1 must be a vector, not NULL
#20
nikosbosse
closed
4 years ago
9
Update readme
#19
nikosbosse
closed
4 years ago
0
merge to update branch
#18
nikosbosse
closed
4 years ago
0
Cases tooling
#17
seabbs
closed
4 years ago
0
Dev multi samples
#16
seabbs
closed
4 years ago
0
Automated auto-reg model hangs if data is to short and lag is to long
#15
seabbs
closed
4 years ago
1
Handle multiple samples at once
#14
seabbs
closed
4 years ago
1
corrected typo "observations"
#13
nikosbosse
closed
4 years ago
1
Correct error in plotting
#12
nikosbosse
closed
4 years ago
0
plot_forecast_evaluation() for several regions can't actually plot observed values for several regions
#11
nikosbosse
closed
4 years ago
2
Function compare_timeseries should throw a meaningful error, if a timeseries is too short
#10
nikosbosse
closed
4 years ago
6
Incidence
#9
nikosbosse
closed
4 years ago
0
Added case prediction
#8
seabbs
closed
4 years ago
1
merge to continue working on the branch
#7
nikosbosse
closed
4 years ago
0
score_model function dimension problem
#6
nikosbosse
closed
4 years ago
6
Test package on real Rt traces
#5
seabbs
closed
4 years ago
0
Validate against incidences
#4
seabbs
closed
4 years ago
1
Plot incidences
#3
seabbs
closed
4 years ago
2
pseudocode for predict incidences
#2
nikosbosse
closed
4 years ago
3
Predict incidences
#1
seabbs
closed
4 years ago
0
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