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etetoolkit
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ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
http://etetoolkit.org
GNU General Public License v3.0
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M1 MacBook Pro Installation Problem (osx-arm64?)
#656
VeritatemAmo
opened
1 year ago
5
GTDBTaxa query needs to update with GCA calls in NCBI
#655
dengzq1234
closed
1 year ago
1
inconsistent performance of RectFace and CircleFace in aligned position in ete4
#654
dengzq1234
closed
1 year ago
1
Taxquery v2
#653
dengzq1234
closed
1 year ago
0
How to loop multiple trees in a single newick file
#652
singing-scientist
opened
1 year ago
4
ETE4.0.0 manual
#651
sarscov2
closed
1 year ago
4
PieChartFace' object has no attribute 'tooltip'
#650
dengzq1234
opened
1 year ago
0
branch_range in populate() is used instead of support_range
#649
maremita
closed
1 year ago
0
using a different version of codeml
#648
Bessem06
opened
1 year ago
0
Deprecated documentation parameter names
#647
Creative-Ataraxia
opened
2 years ago
0
fix typing error
#646
Creative-Ataraxia
closed
2 years ago
0
plotting a large tree is not clear
#645
josenikhid97
opened
2 years ago
0
Using all names in newick format raise NewickError
#644
ElpadoCan
closed
2 years ago
1
83 warnings, 3 errors in tests
#643
yurivict
opened
2 years ago
0
ete_toolchain for ARM / Apple Silico?
#642
josesho
opened
2 years ago
1
How can we get leaf and non-leaf node from NCBITaxa?
#641
YojanaGadiya
opened
2 years ago
1
Disabling leaf face rotation in circular layout
#638
edikedik
opened
2 years ago
0
fix etetoolkit/ete#255
#637
gaojunxuan
closed
1 year ago
0
Support for "jplace newick" format in newick parser
#636
blinard-BIOINFO
closed
1 year ago
4
PyQt-related bug causing Tree.render() to fail
#635
realmichaelhoffert
opened
2 years ago
3
Img face
#634
jorgebotas
closed
2 years ago
0
Ete4 evocell
#633
dengzq1234
closed
2 years ago
0
Evocell layout
#632
dengzq1234
closed
2 years ago
0
Bug in toy example
#631
magibc
opened
2 years ago
0
rename tip label by a mapping table for multiphylo tree
#630
neptuneyt
opened
2 years ago
1
Ete4 gtdbquery annotation
#629
dengzq1234
closed
2 years ago
1
GTDBTaxa() bugs fixed; update
#628
dengzq1234
closed
2 years ago
1
Unable to parse Open Tree of Life Newick
#627
soungalo
opened
2 years ago
2
Dashed line between leaf node and aligned face
#626
codemeleon
opened
2 years ago
0
Bug when using "aligned" position to render tree in SVG format
#625
aleferna12
opened
2 years ago
0
TreeStyle.scale not working as expected (bug)
#624
aleferna12
opened
2 years ago
0
Problem with custom path to taxdump.tar.gz
#623
aziele
opened
2 years ago
1
please respect TMPDIR envar if available
#622
EricDeveaud
opened
2 years ago
1
add GitHub URL for PyPi
#621
andriyor
closed
1 year ago
0
Error while installing ete_build.cfg
#620
tarunpal33
opened
2 years ago
0
Cant install using conda on linux
#619
amcpherson
opened
2 years ago
0
RecursionError: maximum recursion depth exceeded while pickling an object
#618
lafranco
opened
2 years ago
2
fix type errors when rendering into a png
#617
pschwientek
closed
1 year ago
3
Errors with t.show()
#616
csx202201
opened
2 years ago
5
TreeNode.img_style has wrong description in docs
#615
danpal96
opened
2 years ago
0
Difficulties with codeml output
#614
pedro-mmartins
opened
2 years ago
8
stv: fix zoom sensitivity when using osx trackpad and apple mouse
#613
jhcepas
opened
2 years ago
1
more precise adjustment of the aligned panel to the most distant leaf. It might require calculate text bounding boxes
#612
jhcepas
opened
2 years ago
1
the aligned panel showing taxonomic looks like a single convoluted band at first, until first zoom action
#611
jhcepas
opened
2 years ago
0
solve performance problems with large multifurcated nodes
#610
jhcepas
opened
2 years ago
0
different force topology behavior
#609
dongzhang0725
closed
2 years ago
2
NodeStyle documentation 'node_bgcolor'
#608
tonytony99
opened
2 years ago
0
Is there an example how use ete with scipy.cluster.hierarchical?
#607
sorenwacker
opened
2 years ago
2
Reorganize control panel
#606
jorgebotas
closed
2 years ago
0
Aligned zoom
#605
jorgebotas
closed
2 years ago
0
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