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etetoolkit
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ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
http://etetoolkit.org
GNU General Public License v3.0
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Aligned zoom
#604
jorgebotas
closed
2 years ago
0
Aligned panel headers
#603
jorgebotas
closed
2 years ago
0
Add feature to ete4: TreeNode:to_str()
#602
jordibc
closed
2 years ago
0
fixes _smfaces and syncs with recent changes in ete3 master
#601
jhcepas
closed
2 years ago
0
Towards ETE 4
#600
jhcepas
closed
1 year ago
0
small fix in import
#599
jhcepas
closed
2 years ago
0
fixes small problem in import
#598
jhcepas
closed
2 years ago
0
removes six dependency; imports are all relative; treeview can coexists
#597
jhcepas
closed
2 years ago
0
merge ete_diff into ete4
#596
dengzq1234
closed
2 years ago
0
basic ete4 explore in command line
#595
dengzq1234
closed
2 years ago
0
Fixes PhyloTree and NCBITaxa to pass all unittests
#594
jhcepas
closed
2 years ago
0
Goes back to original newick parser and rooting function
#593
jhcepas
closed
2 years ago
0
Aligned panel headers
#592
jorgebotas
closed
2 years ago
0
Increase the usage of augmented assignment statements
#591
elfring
opened
2 years ago
0
replaced 'is' with '=='
#590
glebzhelezov
closed
2 years ago
0
Ncbi update option
#589
JohnBioinf
closed
1 year ago
0
Advance selection
#588
jorgebotas
closed
2 years ago
0
Tree custom layouts
#587
jorgebotas
closed
2 years ago
0
Advance search
#586
jorgebotas
closed
2 years ago
0
Out of memory when NCBITaxa.get_topology is called with a single argument
#585
wbazant
opened
2 years ago
0
Tree scale included in Smartview through front end
#584
jorgebotas
closed
2 years ago
0
Newick parser debugging
#583
jorgebotas
closed
2 years ago
0
Node selection
#582
jorgebotas
closed
2 years ago
0
Inner selected nodes as squares
#581
jorgebotas
closed
2 years ago
0
External plugin support
#580
jorgebotas
closed
2 years ago
0
Minimap bug
#579
jorgebotas
closed
2 years ago
0
Scale bar
#578
theo-allnutt-bioinformatics
closed
2 years ago
1
Wrong background colors for linked alignment
#575
Just08
closed
2 years ago
2
Props debugging
#574
jorgebotas
closed
3 years ago
0
Props debugging gtdbquery
#573
dengzq1234
closed
3 years ago
1
Pixi stv
#572
jorgebotas
closed
3 years ago
0
Ete4 debugging
#571
jorgebotas
closed
3 years ago
0
Props debugging phylo
#570
dengzq1234
closed
1 year ago
5
Resolve #568. Tight adjustment of faces in circular mode
#569
luederm
closed
1 year ago
1
Issues with Circular Layout
#568
luederm
closed
1 year ago
2
QtGui standalone and embedded. Minor tree changes in available tree drawing functions (ladderize nodes)
#567
m-nikolaidis
opened
3 years ago
0
QtGUI updates. Possible to use ete GUI from other application
#566
m-nikolaidis
closed
3 years ago
2
How to show all nodes name?
#565
KunFang93
closed
2 years ago
3
tree clades missing in output file from ete4 build
#564
dengzq1234
closed
2 years ago
2
python 3.8 incompatibility in phylomedb/phylomeDB3.py
#563
melop
closed
2 years ago
1
allow any callable as argument to TreeStyle.set_layout_fn
#562
jfaccioni
closed
1 year ago
0
KeyError: 'BEB' Issue with site and branch-site models in paml
#561
kdarragh1994
opened
3 years ago
0
please provide list external tools with expected version
#560
EricDeveaud
opened
3 years ago
0
Name attribute does not handle "&" within a string properly when trying to print
#559
turbonate
opened
3 years ago
1
Simplify smartview server
#558
jorgebotas
closed
3 years ago
0
Ultrametric trees in smartview
#557
jorgebotas
closed
3 years ago
0
AttributeError: 'NoneType' object has no attribute 'up'
#556
rresendepinto
opened
3 years ago
0
Include aligned panel in smartview downloads
#555
jorgebotas
closed
3 years ago
0
Correct aligned panel in circular mode.
#548
jorgebotas
closed
3 years ago
0
Newick formats
#547
jorgebotas
closed
3 years ago
0
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