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fhui28
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CBFM
Spatio-temporal joint species distribution modeling using community-level basis functions
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Nitpicking!
#42
BertvanderVeen
opened
2 months ago
0
Remove randomfields dependency in all the examples
#41
fhui28
closed
2 months ago
1
Defaults do not work for two species due to rank defaults being crap
#40
fhui28
opened
4 months ago
0
Correcting issues in README file
#39
fhui28
closed
1 year ago
0
Adding knots and ziknots arguments to CBFM.
#38
fhui28
closed
1 year ago
0
Updating README file
#37
fhui28
closed
1 year ago
0
Post MEE updates
#36
fhui28
closed
1 year ago
0
Add fine-scale variation option
#35
fhui28
opened
1 year ago
1
Minor updates to check halfnormalbasis effects.
#34
fhui28
closed
2 years ago
0
Halfnormalbasiseffects
#33
fhui28
closed
2 years ago
0
Example of how to use G_control$structure for a hierarchical GAM
#32
fhui28
opened
2 years ago
0
Initialvaluemethod
#31
fhui28
closed
2 years ago
0
Merge pull request #29 from fhui28/master
#30
fhui28
closed
2 years ago
0
Update ML branch for completeness
#29
fhui28
closed
2 years ago
0
ML updates
#28
fhui28
closed
2 years ago
0
ziCBFM
#27
fhui28
closed
2 years ago
0
Adding reference to single-fit bootstrapping
#26
fhui28
closed
2 years ago
0
Adding zero inflation where probabilities of zero inflation can be affected by covariates
#25
fhui28
closed
2 years ago
2
Residual plotting issues for hurdle and ztnb fits...
#24
chrishaak
closed
2 years ago
1
Nonzeromean b fcoefs
#23
fhui28
closed
2 years ago
0
Species-specific Gamma?
#22
chrishaak
closed
2 years ago
1
Modified CBFM predictions for presence-absences responses
#21
fhui28
opened
2 years ago
0
Flexible sigma
#20
fhui28
closed
2 years ago
0
Error when fitting CBFM-gam with tensor interaction (ti)
#19
chrishaak
closed
2 years ago
2
Hierarchical or grouped smoothing?
#18
fhui28
opened
2 years ago
6
Broaden beta_dampens to deal with species or covariates?
#17
fhui28
closed
2 years ago
1
error when fitting cbfms with zero-truncated families
#16
chrishaak
closed
2 years ago
1
Add method = "ML" to updating basis function coefficients?
#15
fhui28
closed
2 years ago
1
Should logLik and other ICs use estimated DFs instead of fixed DFs for the basis function component
#14
fhui28
closed
2 years ago
1
More (flexible count) distributions?
#13
chrishaak
closed
2 years ago
5
Faster plot.CBFM
#12
fhui28
closed
2 years ago
1
Maybe add time recording for main CBFM function
#11
fhui28
closed
2 years ago
1
Adapting k.check for spatio-temporal basis functions?
#10
fhui28
closed
4 months ago
1
Do approximate simulation from posterior with CBFM?
#9
fhui28
closed
2 years ago
1
Something about concurvity for CBFMs?
#8
fhui28
closed
3 years ago
1
Simple example of ordination for CBFM
#7
fhui28
opened
3 years ago
0
Move calculation of Tweedie weights into .neghessfamily function itself...
#6
fhui28
closed
3 years ago
1
Effective degrees of freedom
#5
fhui28
closed
3 years ago
1
Computational Bottleneck and potentially uncertainty quantification of G and Sigma
#4
fhui28
opened
3 years ago
2
Zero inflated distributions
#3
fhui28
closed
3 years ago
4
More plotting
#2
fhui28
closed
1 year ago
9
summary.CBFM.R
#1
fhui28
closed
3 years ago
2