flatironinstitute CaImAn-MATLAB issues

flatironinstitute / CaImAn-MATLAB

Complete Matlab pipeline for large scale calcium imaging data analysis

GNU General Public License v2.0

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issues

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Problem with removing components using manually_refine_components.m

#115 ajmack-utah opened 2 years ago
0
Porblem with normcorre: Index in position 3 is invalid. Array indices must be positive integers or logical values.

#114 Mtkostecki opened 3 years ago
0
Variable mis-named?

#113 nobias opened 3 years ago
0
run_CNMF_patches indices compatibility

#112 hyewkim opened 3 years ago
0
ERROR:Unrecognized function or variable 'graph_conn_comp_mex'.

#111 albitcaban opened 4 years ago
2
Issue in run_pipeline line 127

#110 CharlieOC19 opened 4 years ago
0
Seeded Initialization script

#109 eltabbal opened 4 years ago
0
Error with p value

#108 oregonGCAMP opened 4 years ago
0
Trouble using ROI_GUI

#107 CharlieOC19 closed 4 years ago
1
Error in run_pipeline

#106 jic0101 closed 4 years ago
1
Error in run_CNMF_patches (line 121) - [idx, value] = fetchNext(future_results);

#105 connorjohnson1 closed 4 years ago
2
Errors in demo

#104 saglag opened 5 years ago
7
Undefined function or variable 'NoRMCorreSetParms'.

#103 tomatoccoo closed 5 years ago
2
How to estimate resting-state F0?

#102 wenxuanliang closed 5 years ago
2
Potential improvement on construct_patches.m

#101 wenxuanliang closed 5 years ago
4
Question regarding the hard-coded 65x65 search frame

#100 wenxuanliang closed 5 years ago
1
How to tune eta and beta for sparse_NMF_initialization.m

#99 wenxuanliang closed 5 years ago
4
Question on PSD Calculation

#98 wenxuanliang closed 5 years ago
10
Error using get_noise_fft (line 13) Too many output arguments.

#97 tochenan opened 5 years ago
4
run_pipeline error - Undefined function or variable 'NoRMCorreSetParms'.

#96 tochenan closed 5 years ago
1
Error using parallel.FevalFuture/fetchNext

#95 674067482 closed 5 years ago
1
error in demo_endoscope

#94 elizabethpereida closed 5 years ago
1
demo_endoscope

#93 zoranne closed 5 years ago
1
exp2 kernel error in cvx_foopsi

#92 jrclimer closed 5 years ago
6
DEMO_pipeline

#91 Mocambo90 closed 5 years ago
9
Optimization of time constants when solving the AR2 Model

#90 ehennestad closed 5 years ago
6
F_dff time shifted compared to F_full?

#89 grego1979 closed 5 years ago
2
detrend_df_f

#88 grego1979 closed 5 years ago
0
Error run_pipeline.m -- sizY?

#87 akim5651 closed 5 years ago
2
Processing many .tif files

#86 PhantomSpike closed 5 years ago
1
what's the difference between DF/F extracted by extract_DF_F.m and plot_components_GUI.m ?

#85 chunyueli closed 5 years ago
7
importKerasNetwork

#84 grego1979 closed 6 years ago
3
process multiple sessions using run_pipeline

#83 chunyueli closed 5 years ago
4
Order of components obtained by "demo_patches.m" ?

#82 hubhubhang closed 5 years ago
2
Memory error using demo_patches

#81 hubhubhang closed 6 years ago
3
Tips on using demo_patch ?

#80 hubhubhang closed 6 years ago
1
run_pipeline error

#79 szocs93 closed 6 years ago
8
Error message in using demo_patches.m - Unable to read HDF5 file 'cnn_model.h5'. The error message was: 'The filename specified was either not found on the MATLAB path or it contains unsupported characters.''

#78 hubhubhang closed 6 years ago
11
Error in CNM.fitPatches

#77 JSignoretGenest closed 6 years ago
3
paste centroids of neurons as a ROI_list

#76 LoOthar closed 6 years ago
2
ROI_GUI.m requires 8 varargin, but gets only 6 in pipeline.m

#75 pgoltstein closed 6 years ago
9
finishing GUI, debugging and creating a test

#74 jkobject closed 7 years ago
0
reparing the reported issue

#73 jkobject closed 7 years ago
0
Reference to non-existing field in new ROI_GUI.m code

#72 HagaiHargil closed 7 years ago
21
new GUI.

#71 jkobject closed 7 years ago
0
Adding a live script

#70 jkobject closed 7 years ago
0
improved demo efficiency

#69 agiovann closed 7 years ago
3
refactoring demo for neurofinder02.00

#68 agiovann closed 7 years ago
0
Error in register_ROI.m

#67 masa6161 closed 7 years ago
9
Fix single patch bug

#66 jennan closed 7 years ago
1