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flatironinstitute
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CaImAn-MATLAB
Complete Matlab pipeline for large scale calcium imaging data analysis
GNU General Public License v2.0
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greedyROI: clrear data matrix, avoid out-of-memory in nnmf call
#65
YishGene
closed
7 years ago
1
Implementation for neurofinder/spikefinder challenges
#64
alexklibisz
closed
7 years ago
2
Error When running pipeline script
#63
vd2309
closed
7 years ago
5
estimated spikes not returned by run_CNMF_patches
#62
jennan
closed
7 years ago
1
refactoring run_CNMF_patches
#61
jennan
closed
7 years ago
1
Finding relevant coordinates from Coor variable for each file
#60
HagaiHargil
closed
7 years ago
2
Errors while handling loaded workspace variables as input
#59
HagaiHargil
closed
7 years ago
3
utilities from vhtools_mltbx_toolbox
#58
stevevanhooser
closed
7 years ago
1
added some Matlab-style documentation and extra documentation to some…
#57
stevevanhooser
closed
7 years ago
2
Memory issue in get_noise_fft
#56
YishGene
closed
7 years ago
2
demo_3d.m throws error at update_spatial_components
#55
aandreev0
closed
7 years ago
3
"N-dimensional indexing allowed for full matrices only."
#54
m0userat25
closed
7 years ago
2
bug in memmap_file
#53
Enakcihc
closed
7 years ago
1
bugs in Update_spatial_lasso and classify_comp_corr
#52
dpacheco0921
closed
7 years ago
0
update_spatial_components expects [A,b] when options.spatial_method == 'regularized'
#51
YishGene
closed
7 years ago
0
run_CNMF_patches, out of memory errors
#50
marius10p
closed
7 years ago
6
merge two OASIS folders, remove unnecessary files from CNMF-E
#49
zhoupc
closed
8 years ago
0
fix a typo in deconvolveCa.m
#48
zhoupc
closed
8 years ago
0
add a wrapper for all deconvolution algorithms
#47
zhoupc
closed
8 years ago
0
Bug + make IND sparse
#46
dpacheco0921
closed
8 years ago
0
Minor changes
#45
dpacheco0921
closed
8 years ago
1
Same scaling of YrA as C and S. YrA provided as optional input. nA pr…
#44
farznaj
closed
7 years ago
0
Update get_noise_fft.m
#43
dpacheco0921
closed
8 years ago
1
Update order_ROIs.m
#42
farznaj
closed
7 years ago
0
Update update_temporal_components.m
#41
farznaj
closed
7 years ago
0
bug in run_CNMF_patches
#40
dpacheco0921
closed
8 years ago
1
bugs when handling 3D data
#39
dpacheco0921
closed
8 years ago
1
latest update to update_temporal_components is incompatible with memory mapping
#38
Selmaan
closed
8 years ago
1
Fix two resizing bugs
#37
fabiansinz
closed
8 years ago
2
Bugfix view_components
#36
YishGene
closed
8 years ago
2
Update merge_components.m
#35
farznaj
closed
8 years ago
2
Update initialize_components.m
#34
farznaj
closed
8 years ago
0
Update CNMFSetParms.m
#33
farznaj
closed
8 years ago
0
Update order_ROIs.m
#32
farznaj
closed
8 years ago
1
Update threshold_components.m
#31
farznaj
closed
8 years ago
0
Update extract_DF_F.m
#30
farznaj
closed
8 years ago
0
extracting spike rate from traces
#29
vd2309
closed
8 years ago
1
Update postProcessCNMF.m
#28
NTCColumbia
closed
8 years ago
0
Add Use-input ROIs and Result Visualization
#27
NTCColumbia
closed
8 years ago
0
error in make_patch_video
#26
vd2309
closed
8 years ago
3
Coor.x'*A(:,1:nr)./sum(A(:,1:nr));
#25
vd2309
closed
8 years ago
2
Master
#24
zhoupc
closed
8 years ago
0
add new initialization method based on local correlation
#23
zhoupc
closed
8 years ago
0
new initialization method based on local correlation and SNR
#22
zhoupc
closed
8 years ago
0
The inferred and raw trace(filtered)
#21
yatangli
closed
8 years ago
1
Error using cvxprob
#20
jafphd
closed
8 years ago
3
Support for multiple background components (nb>1).
#19
ingiehong
closed
8 years ago
1
Update README URLs based on HTTP redirects
#18
ReadmeCritic
closed
8 years ago
0
bug in merge_components when not using fast_merge
#17
jpakan
closed
8 years ago
1
greedy + sparse initialization
#16
gregoriog
closed
8 years ago
2
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