issues
search
galaxyproject
/
pulsar
Distributed job execution application built for Galaxy
https://pulsar.readthedocs.io
Apache License 2.0
37
stars
50
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Jobs in post-processing not resumed after restart
#371
martindemko
opened
1 month ago
0
WIP: pulsar file collector
#370
mvdbeek
opened
2 months ago
0
Ensure that _external_ids keys are strings
#369
mvdbeek
opened
2 months ago
0
Don't immediately resume ``_monitor_active_jobs`` on exception
#368
mvdbeek
closed
2 months ago
0
Close (almost) all file handles
#367
mvdbeek
opened
2 months ago
0
Always close pycurl instance
#366
mvdbeek
opened
2 months ago
0
Do not attempt to complete pre- or post-process if jobs are cancelled in the middle of either stage
#365
natefoo
closed
4 months ago
2
Outputs of deleted jobs are repeatedly uploaded to Galaxy until giving up when using `remote_transfer_tus`
#364
natefoo
closed
4 months ago
1
Resume support for remote_transfer_tus
#363
natefoo
opened
4 months ago
2
curl remote transfers have no timeout
#362
natefoo
opened
4 months ago
0
Send accept-encoding: identity to get correct content-length on head …
#361
mvdbeek
closed
4 months ago
1
Update job_managers.rst
#360
peterg1t
closed
4 months ago
1
Exception: Must specify user submit parameter with this manager.
#359
peterg1t
opened
4 months ago
0
Node failure job with no `return_code` file still marked as successful in Galaxy
#358
natefoo
opened
4 months ago
0
Support configuring the AMQP heartbeat interval, or disabling heartbeats
#357
natefoo
opened
5 months ago
0
Restart kills preprocessing jobs
#356
cat-bro
closed
1 week ago
2
Deleted jobs do not get cleaned up from `${manager}-preprocessing-jobs`
#355
natefoo
opened
5 months ago
1
Losing jobs on restart while postprocessing
#354
natefoo
opened
5 months ago
0
Do not retry on 403 error
#353
natefoo
closed
4 months ago
0
TEMP/TMPDIR and co are not set to the JWD by default
#352
bgruening
closed
7 months ago
1
Implement tus uploads in Pulsar client.
#351
jmchilton
closed
7 months ago
0
Sync job file template with galaxy
#350
mvdbeek
closed
8 months ago
0
Queue/limits for pre- and post-processing
#349
natefoo
opened
9 months ago
0
Skip download of files that are already completely transferred
#348
mvdbeek
closed
9 months ago
2
Use unicodify to deal with potential binary contents
#347
mvdbeek
closed
9 months ago
0
Can't handle binary data in output streams
#346
natefoo
closed
9 months ago
0
[WIP] Feature: Send stdout and stderr to Galaxy while job is running
#345
gecage952
opened
9 months ago
0
MQ unacknowledged retries are not very multiprocess-intelligent
#344
natefoo
opened
9 months ago
0
Postprocessing POST returns 403 with nothing logged other than the request
#342
natefoo
opened
9 months ago
0
Tool files are copied without execute bit
#341
natefoo
opened
10 months ago
0
Restarting Pulsar is not safe
#340
natefoo
closed
8 months ago
4
Fail jobs when output files exist but stage out fails
#339
natefoo
opened
11 months ago
0
Add catchall OSError to recoverable exceptions
#338
mvdbeek
closed
11 months ago
1
Add explicit TimeoutError catching
#337
mvdbeek
closed
1 year ago
0
Update to the readthedocs configuration is needed
#336
bgruening
closed
1 year ago
5
Support Container Scheduling with Azure Batch
#335
jmchilton
opened
1 year ago
0
Update galaxy-job-metrics requirement
#334
cat-bro
closed
1 year ago
0
Drop nose
#333
neoformit
opened
1 year ago
0
Add .readthedocs.yaml
#332
natefoo
closed
1 year ago
3
Also try recovering from ConnectionResetError
#331
mvdbeek
closed
1 year ago
2
Support rewriting the image name
#330
natefoo
opened
1 year ago
2
Transfer retries fix
#329
neoformit
opened
1 year ago
7
Consumer quitting in problematic fashion
#328
astalosj
closed
1 year ago
11
Jobs take a long time to complete if all expected files are not created
#327
martinwolst
opened
1 year ago
0
problem on communication between galaxy,rabbitmq and pulsar
#326
potant
closed
6 months ago
0
Catch drain timeout without verbose log message
#325
mvdbeek
closed
1 year ago
0
Allow recovery from rabbitmq restart
#324
mvdbeek
closed
1 year ago
0
Add publish timeout option to kombu
#323
mvdbeek
closed
1 year ago
1
Add support for logging to sentry
#322
mvdbeek
closed
1 year ago
0
User auth plugins
#321
SergeyYakubov
closed
1 year ago
3
Next