issues
search
genepi
/
umi-pipeline-nf
Nextflow pipeline to analyze ONT UMI Sequencing data
Mozilla Public License 2.0
2
stars
1
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Update snapshots
#72
AmstlerStephan
closed
1 week ago
0
add parser of mutserve output
#71
AmstlerStephan
closed
1 week ago
0
Update branch
#70
AmstlerStephan
closed
1 week ago
0
Nf test
#69
AmstlerStephan
closed
1 week ago
0
Merge nf-test into main
#68
AmstlerStephan
closed
1 week ago
0
Update to newest release
#67
AmstlerStephan
closed
1 week ago
0
Access to raw data from 2024 paper?
#66
cnk113
opened
4 weeks ago
1
Interpreting test output
#65
ebwinter95
closed
1 month ago
2
Prepare Release 0.2.0
#64
AmstlerStephan
closed
3 months ago
0
Add credits
#63
AmstlerStephan
closed
3 months ago
0
update dev
#62
AmstlerStephan
closed
3 months ago
0
Merge latest version with adapted clustering strategy
#61
AmstlerStephan
closed
3 months ago
0
Adapt clustering multithreading
#60
AmstlerStephan
closed
3 months ago
0
Update Documentation and add metro-map
#59
AmstlerStephan
closed
3 months ago
0
Update main.nf
#58
AmstlerStephan
closed
4 months ago
0
add pyfastx to environment
#57
AmstlerStephan
closed
9 months ago
0
Code refactoring
#56
AmstlerStephan
closed
10 months ago
0
Code refactoring
#55
AmstlerStephan
closed
10 months ago
0
Solve docker
#54
AmstlerStephan
closed
10 months ago
0
Update nextflow.config
#53
AmstlerStephan
closed
10 months ago
0
Code refactoring
#52
AmstlerStephan
closed
10 months ago
0
Merge pull request #50 from AmstlerStephan/main
#51
AmstlerStephan
closed
11 months ago
0
update dev
#50
AmstlerStephan
closed
11 months ago
0
Update README.md
#49
AmstlerStephan
closed
1 year ago
0
Dev
#48
AmstlerStephan
closed
1 year ago
0
Update readme
#47
AmstlerStephan
closed
1 year ago
1
Update readme
#46
AmstlerStephan
closed
1 year ago
0
Update usage.md
#45
AmstlerStephan
closed
1 year ago
0
Update and rename LICENSE to LICENSE.md
#44
AmstlerStephan
closed
1 year ago
0
update dev
#43
AmstlerStephan
closed
1 year ago
0
Pcsf count
#42
AmstlerStephan
closed
1 year ago
1
Filter channels alignment
#41
AmstlerStephan
closed
10 months ago
0
error handling no clusters found
#40
AmstlerStephan
opened
1 year ago
0
Detect umi
#39
AmstlerStephan
closed
1 year ago
0
Filtering
#38
AmstlerStephan
closed
1 year ago
0
enclosed report files to delay invocation
#37
AmstlerStephan
closed
1 year ago
0
changed filter to include all double digit numbers
#36
AmstlerStephan
closed
1 year ago
0
Dev
#35
AmstlerStephan
closed
1 year ago
0
Adapt Medaka Model for V14
#34
AmstlerStephan
closed
10 months ago
1
Catfish parameter filter fastq
#33
AmstlerStephan
closed
1 year ago
0
Variant calling input
#32
AmstlerStephan
closed
1 year ago
0
Dev
#31
AmstlerStephan
closed
1 year ago
0
debug = true
#30
AmstlerStephan
closed
1 year ago
0
Adapting barcode filtering
#29
AmstlerStephan
closed
1 year ago
0
Merge pull request #27 from AmstlerStephan/main
#28
AmstlerStephan
closed
1 year ago
0
update
#27
AmstlerStephan
closed
1 year ago
0
Dev
#26
AmstlerStephan
closed
1 year ago
0
Ignore empty or nearly empty barcodes!
#25
AmstlerStephan
closed
1 year ago
1
Dev
#24
AmstlerStephan
closed
1 year ago
0
Readme
#23
AmstlerStephan
closed
1 year ago
0
Next