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Yleaf
Yleaf software for human Y-chromosomal haplogroup inference from next generation sequencing data
GNU General Public License v3.0
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Yleaf.py error: [E::mpileup] fail to parse region 'None' with /home/haikev/y_leaf/y_leaf/007_KAPA_R1/007_KAPA_R1.bam
#28
Haike2002
opened
1 week ago
0
Whether the software can be used for other species
#27
ld9866
opened
1 month ago
0
Add T2T positions?
#26
teepean
opened
6 months ago
4
Added functionalities for working with ancient DNA, and automatic pai…
#25
dionzand
closed
6 months ago
0
Add Yleaf to PyPI/bioconda
#24
TCLamnidis
opened
6 months ago
1
Added functionalities for working with ancient DNA, and automatic pai…
#23
dionzand
closed
6 months ago
0
V3.2
#22
dionzand
closed
7 months ago
0
fixed log parsing
#21
Stikus
closed
8 months ago
0
Difference in results between Yleaf v3.0.1 and v3.1 (master)
#20
Stikus
closed
7 months ago
15
output
#19
massi287
closed
7 months ago
1
Fixed some bugs to make the old prediction algorithm working
#18
dionzand
closed
1 year ago
0
Report quality score
#17
dionzand
closed
1 year ago
0
Old Prediction Option not using the correct files
#16
cascadingstyletrees
closed
9 months ago
2
Fix Old Position File Reference
#15
cascadingstyletrees
closed
1 year ago
0
Few queries
#14
Agenetics
closed
6 months ago
2
Error indicated when running Yleaf installed with conda on CentOs
#13
thierrygrange
closed
1 year ago
1
What if input paired-end reads fastq file
#12
QianXiaobo
closed
1 year ago
2
hg19
#11
npsonis
closed
1 year ago
7
No such file or directory: 'Hg_Prediction_tables/tree.json'
#10
npsonis
closed
2 years ago
7
Docs: mention the support of alignment.bam.bai only, not alignment.bai
#9
serge2016
closed
2 years ago
1
Make Yleaf platform agnostic
#8
teepean
closed
2 years ago
0
Yleaf 3.0
#7
bramvanwersch
closed
2 years ago
0
How to choose the position files?
#6
baif666
closed
2 years ago
2
No haplogroup result if I use the -r1 option
#5
lorepaci
closed
1 year ago
0
Article link in the readme is broken
#4
serge2016
closed
2 years ago
1
2.3 release
#3
serge2016
closed
2 years ago
2
Updating position files
#2
teepean
closed
4 years ago
2
Yleaf.py: error: argument -r/--Reads_thresh: invalid int value: 'ef'
#1
mikaeldahl
closed
4 years ago
6