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genome-rcast
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karkinos
Tumor genotyper, that detects SNV, absolute CNV and Tumor contents
Apache License 2.0
10
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2
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RenameSuggestion
#33
AnonymousAccount4SE
opened
1 year ago
0
Add the karkinos.properties file and tweak the usage in README
#32
federkasten
closed
1 year ago
1
Hotifx broken bullets in README
#31
federkasten
closed
1 year ago
0
Remove unavailable links from README and fix wording
#30
federkasten
closed
1 year ago
0
dbsnp url is not working
#29
KeyTals
closed
1 year ago
0
Loosen the filter condition of INDEL in a normal sample
#28
federkasten
closed
3 years ago
3
Add TerminalMismatch and SoftClipExtention filters
#27
federkasten
closed
3 years ago
3
Enable 'minMisMatchRate'
#26
federkasten
closed
3 years ago
0
Update version
#25
xckitahara
closed
3 years ago
1
Fix threshold of srm filter
#24
federkasten
closed
3 years ago
1
Delete unnecessary files
#23
xckitahara
closed
3 years ago
1
Update README
#22
xckitahara
closed
3 years ago
2
Bump junit from 4.12 to 4.13.1
#21
dependabot[bot]
closed
3 years ago
1
Logic check of the calc function of the WaveletDenoizeACNV class
#20
xckitahara
opened
3 years ago
0
Add test for WaveletDenoizeACNV class
#19
xckitahara
closed
3 years ago
0
Add tests for HMMCNVAnalysisFromEM class
#18
xckitahara
closed
3 years ago
0
Add tests for GaussianWavelet class
#17
xckitahara
closed
3 years ago
0
Add tests for EMMethod class
#16
xckitahara
closed
3 years ago
0
Fix/argument type
#15
xckitahara
closed
3 years ago
0
Fix/removing unused codes
#14
xckitahara
closed
3 years ago
2
Add tests for WaveletDenoize class
#13
xckitahara
closed
3 years ago
3
Fix/loh estimate
#12
xckitahara
closed
3 years ago
2
Add a test for the BailSamplingBean class
#11
xckitahara
closed
4 years ago
0
Add a test for the CopyNumberInterval class
#10
xckitahara
closed
4 years ago
1
Update README
#9
xckitahara
closed
4 years ago
0
CI support.
#8
xckitahara
closed
4 years ago
1
Adding a coverage report.
#7
xckitahara
closed
4 years ago
0
Update repositories url in build.gradle.
#6
xckitahara
closed
4 years ago
0
Unify different ranges into 1-based closed range
#5
r6eve
closed
5 years ago
14
Fix/gradle
#4
alumi
closed
6 years ago
0
Fix commits
#3
alumi
closed
7 years ago
0
ArrayIndexOutOfBoundsException in mergeresult
#2
alumi
closed
7 years ago
3
Build project with gradle
#1
alumi
closed
7 years ago
0