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ggloor
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ALDEx2_dev
ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test
GNU Affero General Public License v3.0
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ALDEx2 for multiple (3) groups
#42
jspychalla
closed
7 months ago
1
Feature request: confidence interval parameter for aldex()
#41
ijhoskins
closed
1 year ago
1
Abnormal raw p-value distribution from aldex.ttest
#40
ijhoskins
closed
1 year ago
2
Unexpected effect directions
#39
ijhoskins
closed
1 year ago
1
Confidence interval
#38
SinaedaA
closed
1 year ago
1
Paired analysis by variable, not order
#37
mariamaseng
closed
7 months ago
1
how to calculate the fold-change in ALDEx2?
#36
zhq90
closed
1 year ago
1
Installation issue
#35
lee-s17
closed
1 year ago
2
Error in data.t[grp1, ] - data.t[grp2, ] : non-conformable arrays
#34
jorondo1
closed
1 year ago
2
code for obtaining all pairwise comparisons under glm module
#33
carburator
closed
1 year ago
3
Cannot install on CentOS 8.6
#32
theo-allnutt-bioinformatics
opened
2 years ago
3
plotting of aldex2 (& picrust2) results?
#31
marwa38
opened
2 years ago
0
updates to aldex.glm and results interpretation
#30
mirpie
opened
2 years ago
2
Generalized Linear model type and Random effect
#29
Abbie-Williams
opened
2 years ago
1
Can't use aldex.effect() on aldex.kw() object
#28
Rob-murphys
closed
2 years ago
2
Problem in calculating the differential OTU abundance based on glm model ALDEx2 version 1.20.0
#27
mbaloza
opened
2 years ago
0
Error running aldex.ttest
#26
dkropp2
closed
2 years ago
0
Feature request: enable modeling random effects
#25
yanxianl
opened
3 years ago
1
Aldex2 aldex.glm results
#24
bmpaddy
opened
3 years ago
1
ALDEx2 clr transformation
#23
miguensblanco
closed
1 year ago
1
Does Aldex2 supports confounding covariate adjustment?
#22
Ivy-ops
opened
3 years ago
0
Feature Request: Specify a "reference" condition
#21
jolespin
closed
3 years ago
7
Several options are giving errors
#20
theo-allnutt-bioinformatics
closed
3 years ago
8
could not find function "aldex.plot"
#19
theo-allnutt-bioinformatics
closed
3 years ago
1
confusion regarding "mc.samples" argument
#18
mirpie
closed
4 years ago
1
aldex.corr() giving correlation values outside -1 to 1
#17
basculethirascule
opened
4 years ago
0
aldex.clr with model.matrix
#16
Maraikep
closed
4 years ago
1
Use aldex.glm to plot with aldex.plot
#15
alopgar
closed
4 years ago
1
Problem in calculating the differential OTU abundance based on ALDEx2
#14
tilaknayak
closed
4 years ago
3
Pron
#13
tilaknayak
closed
4 years ago
0
ALDEx2_1.16.0 output of aldex.corr may have a mistake
#12
daichi-fujii
closed
4 years ago
1
no "conditions" flag option in aldex.effect or aldex.ttest- update directions?
#11
rrohwer
closed
5 years ago
1
Bug in aldex.clr when using glm model matrix
#10
orcuttlab
closed
5 years ago
2
Interpreting ALDEx2 results
#9
nearinj
closed
5 years ago
1
aldex.corr having unexpected behavior
#8
valscherz
closed
5 years ago
1
feature request - controlling for additional variables
#7
mstagliamonte
closed
5 years ago
2
Feature Request - comparisons between multiple groups
#6
stro0070
closed
5 years ago
1
Master
#5
ggloor
closed
8 years ago
0
Proposal for Zero-Removal
#4
JRWu
closed
8 years ago
0
aldex.glm with more complicated glm models
#3
chassenr
closed
8 years ago
7
Implemented Bioconductor suggestions
#2
ruthgrace
closed
9 years ago
2
Cannot get to install
#1
graemeleehickey
closed
10 years ago
1