giannimonaco ABIS issues

giannimonaco / ABIS

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issues

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Incomplete mapping of transcript IDs to the gene names within ABIS-seq matrix

#23 dumpster-fire28 opened 1 month ago
3
How to receive TPM values scaled by RLM for input into other deconvolution methods

#22 pippomz opened 1 year ago
1
Run server.R from Studio

#21 Francis3209 opened 2 years ago
1
Deconvolution of the Whole blood cells transcriptome data using ABIS.

#20 padwalmk opened 2 years ago
3
RLM Warning message when running ABIS locally on a large dataset

#19 sam-israel opened 3 years ago
1
How to combine similar cell types

#18 sam-israel opened 3 years ago
3
PBMC data does not add up to approximately 100 percent

#17 SaTu84 closed 3 years ago
8
Unable to reproduce your paper results

#16 josemss closed 3 years ago
7
Microarrays data, often above 100%

#15 zingobele closed 3 years ago
2
Install issue

#14 slma2021 opened 3 years ago
1
ABIS for tissue RNA-seq data?

#13 ghost opened 3 years ago
1
To use ABIS shiny app for large TCGA data

#12 imrankhan27 opened 3 years ago
1
Estimated frequencies are problematic

#11 erikfel97 closed 3 years ago
1
Input data from Affymetrix arrays

#10 sdwien closed 4 years ago
3
Running the algortihm locally

#9 drhmoosavi closed 4 years ago
6
Preparing TPM files with gene symbol

#8 jasonsaunderswilliams closed 3 years ago
18
information about the output file

#7 ConcettaDe4 closed 3 years ago
1
What exactly is the output?

#6 jordankrull closed 3 years ago
8
Syntax issues on strings 19, 41 & paragraph 03

#5 kant closed 5 years ago
1
could the deconvolution results be compared across samples and cell types?

#4 HelloYiHan closed 3 years ago
1
negative proportions

#3 eegk closed 5 years ago
2
Column names in Gene Browser

#2 sdwien closed 5 years ago
1
number of input reads

#1 sdwien closed 5 years ago
1