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glasgowcompbio
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vimms
A programmable and modular LC/MS simulator in Python
MIT License
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Iss 172a
#175
sdrogers
closed
4 years ago
0
Write out the targeted scans from the targeted controller
#174
joewandy
closed
4 years ago
0
Update BEER_CHEMS
#173
joewandy
closed
3 years ago
3
mzML writer always writing out positive scans
#172
joewandy
closed
4 years ago
0
Iss 162
#171
sdrogers
closed
4 years ago
0
Put the C# log and IAPI raw file to the same folder as output mzML
#170
joewandy
closed
4 years ago
1
TopN controller: mzs shape not the same as intensities shape
#169
joewandy
closed
4 years ago
5
added extra TopN parameter and a new test case
#168
sdrogers
closed
4 years ago
0
Add an option in TopN controllers to always create N MS2 scans
#167
sdrogers
closed
4 years ago
0
Iss 165
#166
sdrogers
closed
4 years ago
0
ms2 checking script
#165
sdrogers
closed
4 years ago
0
Renamed pbar to bar. Also added some check when it's None.
#164
joewandy
closed
4 years ago
0
Can't close progress bar
#163
joewandy
closed
4 years ago
1
Maxit values not set correctly on IAPI
#162
joewandy
closed
4 years ago
9
fix the `test_multiple_chems` test - it fails due to randomness
#161
sdrogers
closed
4 years ago
1
Iss 159
#160
sdrogers
closed
4 years ago
0
improve msp parsing to handle peaks separated by a ';'
#159
sdrogers
closed
4 years ago
0
Reorganised test cases.
#158
joewandy
closed
4 years ago
1
Refactor controller tests
#157
sdrogers
closed
4 years ago
0
added new controller in misc.py and a test in test_controllers
#156
sdrogers
closed
4 years ago
0
Iss 52
#155
joewandy
closed
4 years ago
1
Move get_default_scan_params and get_dda_scan_param out of the environment
#154
joewandy
closed
4 years ago
1
Iss 152
#153
sdrogers
closed
4 years ago
0
Add negative mode into ViMMS mass spec
#152
vinnydavies
closed
4 years ago
3
Write controller to do top 4, with then some ms2 with multiple windows
#151
vinnydavies
closed
4 years ago
2
Change delimiter to allow multiple simultaneous precursor windows
#150
vinnydavies
closed
4 years ago
1
new test added
#149
sdrogers
closed
4 years ago
0
make new test for controller with exclusion
#148
sdrogers
closed
4 years ago
0
fix for MS2Sampler
#147
sdrogers
closed
4 years ago
0
MZMLMS2Sampler needs to sometimes use replacement
#146
sdrogers
closed
4 years ago
0
Fixed 144
#145
sdrogers
closed
4 years ago
0
Target creation from toxid should filter by polarity
#144
sdrogers
closed
4 years ago
4
Iss 135
#143
sdrogers
closed
4 years ago
0
Iss 140
#142
sdrogers
closed
4 years ago
0
make a better AIF test that actually checks fragments
#141
sdrogers
closed
4 years ago
0
Create a controller that takes an inclusion list
#140
sdrogers
closed
4 years ago
0
Removed min_mz and max_mz from AIF and fixed bug in MS that was loo…
#139
sdrogers
closed
4 years ago
3
remove min and max m/z parameters from AIF controller
#138
sdrogers
closed
4 years ago
0
Sequence manager improvements
#137
joewandy
closed
1 year ago
5
Iss 83
#136
vinnydavies
closed
4 years ago
1
Update data creation demos
#135
vinnydavies
closed
4 years ago
6
Merge branch 'master' into iss_131
#134
sdrogers
closed
4 years ago
0
Iss 101
#133
sdrogers
closed
4 years ago
0
added method to create MSDIAL experiment from AIF, added test, added …
#132
sdrogers
closed
4 years ago
0
MSDIAL experiment file from AIF
#131
sdrogers
closed
4 years ago
0
Iss 129
#130
sdrogers
closed
4 years ago
0
MS2 sampler that uses MS2 scans from an mzML file
#129
sdrogers
closed
4 years ago
0
Iss 82
#128
vinnydavies
closed
4 years ago
0
added msdial experiment file writing method to SWATH. Needs to be do…
#127
sdrogers
closed
4 years ago
0
mz_tol and rt_tol are not scan parameters
#126
joewandy
opened
4 years ago
3
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