issues
search
glasgowcompbio
/
vimms
A programmable and modular LC/MS simulator in Python
MIT License
19
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Add method in DIA controllers to write out MSDIAL experiment file
#125
sdrogers
closed
4 years ago
0
Add option for Optimal Controller to run as part of Sequence Manager
#124
vinnydavies
closed
2 years ago
4
Test that the custom parameters we set are actually returned in the scans
#123
joewandy
closed
4 years ago
1
Dia examples new methods
#122
vinnydavies
closed
4 years ago
0
Remove scan param creation methods from the environment
#121
joewandy
closed
4 years ago
2
Controller has too many parameters in the constructor
#120
joewandy
closed
4 years ago
4
fixes #118 by using isolation width to determine stop mz and adds a n…
#119
sdrogers
closed
4 years ago
0
Bug in DDA scan parameters
#118
sdrogers
closed
4 years ago
0
Iss 102
#117
sdrogers
closed
4 years ago
0
Got rid of all controllers and mass spec reset methods
#116
joewandy
closed
4 years ago
0
Iss 106
#115
sdrogers
closed
4 years ago
1
Iss 113
#114
joewandy
closed
4 years ago
0
Tidy up codes
#113
joewandy
closed
4 years ago
0
Add method to allow .msp export of a chemical list
#112
sdrogers
closed
4 years ago
0
Iss 106
#111
sdrogers
closed
4 years ago
1
mzml writer cannot handle a list of precursors
#110
sdrogers
closed
4 years ago
1
Iss 108
#109
sdrogers
closed
4 years ago
0
Add SWATH controller
#108
sdrogers
closed
4 years ago
0
Sanitise the ms1 windows
#107
sdrogers
closed
4 years ago
1
Allow controllers to send multiple precursors
#106
joewandy
closed
4 years ago
2
Make sure all controllers specify precursor + isolation width when sending MS2 scans
#105
joewandy
closed
4 years ago
0
Get rid of controller.reset()
#104
joewandy
closed
4 years ago
0
Removed precursor information dictionary
#103
joewandy
closed
4 years ago
0
Generate chemicals from paired formulae + spectra
#102
joewandy
closed
4 years ago
3
Generate chemicals from mzML
#101
joewandy
closed
4 years ago
2
Unit test sometimes still failed on the server
#100
joewandy
closed
4 years ago
1
Iss 98
#99
sdrogers
closed
4 years ago
1
New simplified chemical creator
#98
sdrogers
closed
4 years ago
5
sampling MS2 spectra in data generation now rejects if there are no p…
#97
sdrogers
closed
4 years ago
0
stop sampling of MS2 scans with no peaks in data generation
#96
sdrogers
closed
4 years ago
0
added simple spike noise generation
#95
sdrogers
closed
4 years ago
0
Add spike noise to MS
#94
sdrogers
closed
4 years ago
0
Iss 92
#93
sdrogers
closed
4 years ago
0
amend ROI creation code to be able to create ROIs from MS2. Needed for checking AIF data
#92
sdrogers
closed
4 years ago
0
in AIF controller, first scan is fragment scan?
#91
sdrogers
closed
4 years ago
2
Allow Top-N controller to receive an initial list of exclusions
#90
joewandy
closed
4 years ago
4
TopN controller with an initial exclusion list
#89
joewandy
closed
4 years ago
1
Missing precursor information from MS2 scans of FixedScansController
#88
joewandy
closed
4 years ago
5
Allows controllers to return an initial list of tasks to send to the mass spec
#87
joewandy
closed
4 years ago
0
Ooops
#86
joewandy
closed
4 years ago
0
Spelling error in defaults?
#85
sdrogers
closed
4 years ago
0
Timing plotter
#84
sdrogers
closed
4 years ago
0
add a sequence manager test
#83
vinnydavies
closed
4 years ago
0
Update examples to deal with changes to mass spec class
#82
vinnydavies
closed
4 years ago
4
Sequence manager fix
#81
vinnydavies
closed
4 years ago
0
Iss 57
#80
joewandy
closed
4 years ago
0
Iss78
#79
sdrogers
closed
4 years ago
0
Random seed
#78
sdrogers
closed
4 years ago
0
Controller has too many parameters in the constructor
#77
joewandy
closed
4 years ago
3
added script to make peakonly training data
#76
sdrogers
closed
4 years ago
0
Previous
Next