gogetdata ggd-recipes issues

gogetdata / ggd-recipes

conda recipes for genomic data

MIT License

85 stars 12 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Gene annotation data package request - GENCODE Release 44

#183 EricR86 opened 11 months ago
0
Update GENCODE Canonical Transcript to remove duplicated genes caused…

#182 mikecormier closed 3 years ago
0
Update jinja2

#181 mikecormier closed 3 years ago
0
Workflow docs

#180 mikecormier closed 3 years ago
0
Update Docs with meta-recipe info

#179 mikecormier closed 3 years ago
0
High Identity (>=90%) Self Chains

#178 mikecormier closed 3 years ago
0
Meta Recipe for Gene Expression Omnibus (GEO) database

#177 mikecormier closed 3 years ago
0
Fix appris tags during filtering

#176 mikecormier closed 3 years ago
0
Recipes for v2.1 of gnomAD exome variants

#175 mikecormier closed 3 years ago
0
updates docs page width

#174 brwnj closed 3 years ago
0
Can data packages be stored on a private conda repository instead of on Anaconda cloud?

#173 zhangzhen closed 3 years ago
3
Coding Exons

#172 mikecormier closed 4 years ago
0
UTR only features

#171 mikecormier closed 4 years ago
0
Protein Coding Features from GENCODE and Ensembl

#170 mikecormier closed 4 years ago
0
Update Readme

#169 mikecormier closed 4 years ago
0
Docs update

#168 mikecormier closed 4 years ago
0
CDS Only Features

#167 mikecormier closed 4 years ago
0
Transcript only features

#166 mikecormier closed 4 years ago
0
Gene Only Features Ensembl

#165 mikecormier closed 4 years ago
0
Amino Acid Change score for missense badness, blosum, and granthms

#164 mikecormier closed 4 years ago
0
Gene Only Feature Recipes

#163 mikecormier closed 4 years ago
0
Gencode intron features

#162 mikecormier closed 4 years ago
0
Intron features created from Ensembl Gene Set

#161 mikecormier closed 4 years ago
0
Gencode gtf with introns

#160 mikecormier closed 4 years ago
0
Ensembl gtf only introns

#159 mikecormier closed 4 years ago
0
Ensembl Gene Features files with intron features added

#158 mikecormier closed 4 years ago
0
Gencode tRNA GTFs

#157 jbelyeu closed 4 years ago
0
Pseudogenes

#156 jbelyeu closed 4 years ago
0
Gencode polya gtf

#155 jbelyeu closed 4 years ago
0
Gencode transcripts

#154 jbelyeu closed 4 years ago
0
added recipes for lncrna gtfs

#153 jbelyeu closed 4 years ago
0
added recipes for nucleotide sequences for coding regions

#152 jbelyeu closed 4 years ago
0
Gencode protein coding

#151 jbelyeu closed 4 years ago
0
Gencode lncrna fa

#150 jbelyeu closed 4 years ago
0
Gencode protein coding nuc

#149 jbelyeu closed 4 years ago
0
Gencode lncrna fa

#148 jbelyeu closed 4 years ago
0
Gencode refs

#147 jbelyeu closed 4 years ago
0
added recipes for dbvar SVs

#146 jbelyeu closed 4 years ago
1
New Recipes for cancer genes from Futreal et al.

#145 mikecormier closed 4 years ago
0
Liftover chains

#144 jbelyeu closed 4 years ago
0
GIAB svs in grch37 and hg19

#143 jbelyeu closed 4 years ago
0
Ccdg sv bedpe

#142 jbelyeu closed 4 years ago
0
Haploinsufficient Genes

#141 mikecormier closed 4 years ago
0
Reference Genome from GENCODE v34

#140 mikecormier closed 4 years ago
0
Heart Genes from Sifrim et al

#139 mikecormier closed 4 years ago
0
EIEE Genes from Ostrander et al.

#138 mikecormier closed 4 years ago
0
GENCODE GTF Recipes

#137 mikecormier closed 4 years ago
0
Newer versions of Bioconda-utils causes package conflicts when installing ggd recipes

#136 mikecormier opened 4 years ago
0
UCSC self chain

#135 mikecormier closed 4 years ago
0
Canonical Transcript Gene Features filtered using APPRIS isoform flags

#134 mikecormier closed 4 years ago
0