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hammerlab
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SmartCount
Repository for collaboration on Celldom computer vision solutions
Apache License 2.0
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Bump keras from 2.1.6 to 2.13.1 in /python/source
#77
dependabot[bot]
opened
1 month ago
0
Retraining for new microsccope
#76
eric-czech
opened
5 years ago
0
Custom data operations change the state of the data frame without any easy way to revert back
#75
armish
opened
5 years ago
2
Overview app overhaul and automatic docker builds
#74
eric-czech
closed
5 years ago
0
Adding tools for automated annotation
#73
eric-czech
closed
5 years ago
0
Document models available in GS
#72
eric-czech
opened
5 years ago
1
Add TravisCI
#71
eric-czech
closed
5 years ago
0
Enable exports of partially annotated images
#70
eric-czech
closed
5 years ago
1
Validate M-Ladder chip configs
#69
eric-czech
closed
5 years ago
5
New growth rate model experiments
#68
eric-czech
closed
5 years ago
0
Add end-to-end image processing unit tests
#67
eric-czech
opened
5 years ago
0
Apartment image registration
#66
eric-czech
closed
5 years ago
0
Growth rate modeling debugging with time series clustering
#65
eric-czech
closed
5 years ago
0
G1v2 Configuration and Results
#64
eric-czech
closed
5 years ago
1
Fix app apartment page slowness
#63
eric-czech
closed
5 years ago
0
Correcting Annotations
#62
yellenlab
opened
5 years ago
1
Mean cell counts across arrays
#61
eric-czech
closed
5 years ago
2
Adding resistant cell analysis
#60
eric-czech
closed
5 years ago
0
Resistant Cell Analysis
#59
eric-czech
opened
5 years ago
5
Adding percentage histograms to summary page
#58
eric-czech
closed
5 years ago
0
Support multiple cell types
#57
eric-czech
opened
5 years ago
0
Time zero analysis and support for multiple cell types/components
#56
eric-czech
closed
5 years ago
0
Fix app bug with single time point datasets
#55
eric-czech
closed
5 years ago
1
Apartment image export (for annotation and videos)
#54
eric-czech
closed
5 years ago
0
Add analysis to show image capture timeline
#53
eric-czech
opened
5 years ago
1
Use multiple alignment markers in chips
#52
eric-czech
opened
5 years ago
0
Support fluorescent intensity images
#51
eric-czech
opened
5 years ago
2
Illumination Invariance
#50
eric-czech
closed
4 years ago
3
Add apartment image histogram analysis notebook
#49
eric-czech
opened
5 years ago
0
Add registration for extracted apartment images
#48
eric-czech
closed
5 years ago
2
Detection for 0 Cell Count after t=0
#47
eric-czech
opened
5 years ago
0
Escaping/Entering Cells
#46
eric-czech
opened
5 years ago
0
Add sanity check statistic for cell area segmented
#45
eric-czech
opened
5 years ago
0
Add image exporter from app
#44
eric-czech
closed
5 years ago
1
Establish a way to precisely define time points in an experiment
#43
eric-czech
closed
5 years ago
6
Manual Validation Results
#42
eric-czech
closed
5 years ago
5
Array trapping efficiency, confluence, and single cell initial conditions
#41
eric-czech
closed
5 years ago
0
Need visualization of array heatmaps with fixed scales
#40
eric-czech
closed
5 years ago
1
Add toggle for apartments filtered to n cells == 1 at time zero
#39
eric-czech
closed
5 years ago
1
Apartment Confluence Stopper and Digit Model Training
#38
eric-czech
closed
5 years ago
0
More overview app features
#37
eric-czech
closed
6 years ago
1
PyTables warning for large image databases
#36
eric-czech
opened
6 years ago
0
Adding new array visualizations and normalization
#35
eric-czech
closed
6 years ago
0
Add more array heatmap metrics
#34
eric-czech
closed
6 years ago
1
Heatmap Colorscale Normalization
#33
eric-czech
closed
6 years ago
1
Add toggle for cell annotations in apartment images
#32
eric-czech
closed
6 years ago
1
Future Analysis Ideas
#31
eric-czech
opened
6 years ago
0
Digit model retraining (pt2)
#30
eric-czech
closed
6 years ago
1
Digit model retraining
#29
eric-czech
closed
6 years ago
1
Adding cvutils pull to prd container run command
#28
eric-czech
closed
6 years ago
0
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