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hammerlab
/
prohlatype
Probabilistic HLA typing
Apache License 2.0
35
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4
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Changes to parany.run cause compilation errors
#151
gltrost
opened
2 years ago
0
Update world
#150
rleonid
closed
4 years ago
2
a proposal for `src/scripts/run-example-docker.sh`
#149
biolxy
opened
5 years ago
1
Compile against Partition Maps that are in opam
#148
rleonid
closed
6 years ago
1
align2fasta error - "Couldn't extract sequence align date."
#147
npavlovikj
closed
6 years ago
17
Coverage llhd
#146
rleonid
closed
6 years ago
0
Seb's run example
#145
rleonid
closed
6 years ago
0
Coverage tracking
#144
rleonid
closed
6 years ago
0
Add the `run-example-docker.sh`
#143
smondet
closed
6 years ago
1
little bug in the README
#142
smondet
closed
6 years ago
2
Remove polymorphic comparison
#141
rleonid
opened
6 years ago
0
Testing cruft fixes
#140
rleonid
closed
6 years ago
0
GitHub markdown
#139
rleonid
closed
6 years ago
0
Release
#138
rleonid
closed
6 years ago
0
Group biology
#137
rleonid
closed
6 years ago
0
Error type to the rescue
#136
rleonid
closed
6 years ago
1
Update scraps and scripts
#135
rleonid
closed
6 years ago
1
Report prohlatype & IMGT version and commandline to output.
#134
rleonid
closed
6 years ago
0
Public facing documentation
#133
rleonid
closed
6 years ago
1
New build system
#132
rleonid
closed
6 years ago
0
Add a `Dockerfile` #WIP
#131
smondet
closed
6 years ago
11
Read assignment counts
#130
rleonid
closed
6 years ago
1
Benchmarkb
#129
rleonid
closed
6 years ago
0
Add coverage information to report output
#128
rleonid
closed
6 years ago
1
Promote json_to_tsv into a full fledged app.
#127
rleonid
closed
6 years ago
0
Integrate json_to_tsv into app structure
#126
rleonid
closed
6 years ago
0
Better pm
#125
rleonid
closed
6 years ago
0
Check splicing logic for all Class I loci.
#124
rleonid
closed
6 years ago
2
Support finer splitting mode
#123
rleonid
opened
6 years ago
0
Odds and ends
#122
rleonid
closed
6 years ago
0
Implement the overriding prior feature
#121
rleonid
opened
6 years ago
0
Update align2fasta doc
#120
rleonid
closed
6 years ago
1
Remove ".native" from executables
#119
rleonid
closed
6 years ago
1
Check and finalize public facing documentation
#118
rleonid
closed
6 years ago
0
Standardize versioning logic.
#117
rleonid
closed
6 years ago
0
Fix build system to actually have prohlatype lib.
#116
rleonid
closed
6 years ago
1
Use a tail recursive insert function
#115
rleonid
closed
6 years ago
0
Implement benchmarking logic
#114
rleonid
closed
6 years ago
0
Standardize output
#113
rleonid
closed
6 years ago
0
Use the error type more proactively.
#112
rleonid
closed
6 years ago
1
Reorganize code to centralize biological logic in one module
#111
rleonid
closed
6 years ago
1
Explict reference splitting
#110
rleonid
closed
6 years ago
0
Use parany to implement per-read parallelization.
#109
rleonid
closed
6 years ago
0
Adding nucleic sequence imputation
#108
rleonid
closed
6 years ago
1
Model the insert
#107
rleonid
closed
6 years ago
0
Paired typing
#106
rleonid
closed
7 years ago
0
Add viterbi
#105
rleonid
closed
7 years ago
0
Partition maps for representation
#104
rleonid
closed
7 years ago
1
Argument mapper
#103
rleonid
closed
7 years ago
0
Implement a past likelihood threshold filter.
#102
rleonid
closed
7 years ago
0
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