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hpc-carpentry
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old-hpc-workflows
Scaling studies on high-performance clusters using Snakemake workflows
https://www.hpc-carpentry.org/old-hpc-workflows/
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Consider Parsl
#35
tkphd
closed
1 year ago
2
Develop Snakefile on a node
#34
tkphd
opened
1 year ago
0
Flags on Amdahl
#33
tkphd
opened
1 year ago
0
Inline Python -> Lesson 10
#32
tkphd
opened
1 year ago
0
Add a section on some other workflow tools
#31
bkmgit
closed
1 year ago
0
Add description of of `-j` in the compute cluster configuration.
#30
bkmgit
opened
1 year ago
0
Create a profile
#29
bkmgit
opened
1 year ago
0
Initial development of Amdahl's Law plotting
#28
mikerenfro
closed
1 year ago
8
Moore's law
#27
bkmgit
opened
1 year ago
0
Carpentries Workbench
#26
bkmgit
opened
1 year ago
0
Rework lesson landing page to reflect Amdahl's Law instead of Zipf's.
#24
tkphd
closed
1 year ago
0
Set cores
#23
bkmgit
closed
1 year ago
6
Contact info
#21
bkmgit
closed
1 year ago
0
Add versions to requirements.txt
#20
bkmgit
opened
1 year ago
5
Typo fix
#19
bkmgit
closed
1 year ago
0
Discuss limitations & alternatives to Snakemake
#18
tkphd
opened
1 year ago
4
Location of final code products
#17
vinisalazar
opened
1 year ago
2
SnakeMake best practices
#16
reid-a
opened
1 year ago
5
Review lesson objectives
#15
tobyhodges
opened
1 year ago
9
Update link in README
#14
bkmgit
closed
1 year ago
0
Plotting Amdahl's Law
#13
ocaisa
opened
1 year ago
4
"Perfect" `snakemake` file for Amdahls Law
#12
ocaisa
opened
1 year ago
1
Locations where we may need to use templates
#11
ocaisa
opened
1 year ago
2
Generating our data files
#10
ocaisa
opened
1 year ago
0
protect default branch before sprint
#9
tkphd
closed
1 year ago
1
spelling & linting actions
#8
tkphd
opened
1 year ago
1
primer docs for sprinters
#7
tkphd
closed
1 year ago
1
Add `--terse` option to `amdahl` to make it easier to parse the output
#6
ocaisa
closed
1 year ago
2
Defining the "common workflow" for our lesson
#5
ocaisa
opened
1 year ago
3
Rework `index.md`
#4
ocaisa
closed
1 year ago
1
Update `setup.md` for the HPC use case
#3
ocaisa
opened
1 year ago
3
Provenance of this repository
#2
ocaisa
opened
2 years ago
0