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imagej
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pyimagej
Use ImageJ from Python
https://pyimagej.readthedocs.io/
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Multiple copies of verbose output might be shown
#269
ctrueden
opened
1 year ago
0
imagej.doctor should notice subprocess crashes
#268
ctrueden
opened
1 year ago
0
Failed to guess the Java version/Failed to bootstrap the artifact.
#267
BrandonUL
closed
1 year ago
6
Add converter for `ij.measure.ResultsTable` to `pandas.DataFarme`
#266
elevans
closed
1 year ago
1
Simplify linear axis assignment logic
#265
elevans
closed
1 year ago
1
Add conversion for BitType and BoolType imgs
#264
gselzer
opened
1 year ago
4
Devise a method for version reproducability
#263
gselzer
opened
1 year ago
0
Support optional installation of pyobjc packages by dependency
#262
gselzer
opened
1 year ago
3
package not recognized on Windows 10 using conda env, cannot resolve java version
#261
nakajimayoshi
closed
1 year ago
1
Add an ij.py.show_ui function
#260
ctrueden
opened
1 year ago
11
ij.io().open() does not appear to work for absolute paths
#259
bhacha
closed
1 year ago
2
Add support for `net.imagej.roi.DefultROITree` conversion to Python
#258
elevans
opened
1 year ago
1
Remove redundant properties conversion
#257
gselzer
closed
1 year ago
0
PyImageJ 1.4.1 breaks Jupyter Notebook Debugging in VScode
#256
fschiffers
closed
1 year ago
2
How to fully load the .vsi file
#255
wzr0108
closed
1 year ago
1
I got stuck while running this code
#254
wzr0108
closed
1 year ago
3
Error on importing imagej on standalone executable using cx_Freeze
#253
CanYing0913
closed
1 year ago
2
Support Boolean image conversion
#252
gselzer
closed
1 year ago
1
java.lang.RuntimeException: Macro canceled with DiameterJ Segment
#251
marilin99
opened
1 year ago
5
Add a converter for `ResultsTable` to pandas dataframe
#250
elevans
closed
1 year ago
0
Open OME tiff hyperstacks with the bioformats plugin
#249
anntzer
closed
1 year ago
5
Google Colab example in Install.md yields VerifyError
#248
gselzer
opened
1 year ago
1
xarray.DataArray `imagej` metadata and improved axis/scale logic
#247
elevans
opened
1 year ago
5
Proper way of loading macro scripts
#246
jackyko1991
closed
1 year ago
3
Build system improvements
#245
gselzer
closed
1 year ago
0
Add workflow dispatch trigger
#244
gselzer
closed
1 year ago
2
Pyimagej initialization - failed to create JVM / failed to bootstrap the artifact
#243
VVSBN
closed
1 year ago
9
Add install template for multiple platforms
#242
CanYing0913
closed
1 year ago
2
colour deconvolution
#241
HeChengHui
closed
1 year ago
1
Invalid endpoint with imagej.init('Applications/Fiji.app',mode='interactive')
#240
biosciflo
closed
1 year ago
3
Check for ij legacy in original endpoints
#239
gselzer
closed
1 year ago
1
Enable `dim_order` kwargs for direct image conversions
#238
elevans
closed
1 year ago
3
Failed to run test installation with openjdk8 on Mac M1
#237
clementhelsens
closed
2 years ago
12
init using 'gui' not working and interactive window changes between Java and ImageJ
#236
leosilvero9
closed
1 year ago
1
Running customized plugin in ImageJ "locally" on Colab
#235
CanYing0913
closed
1 year ago
2
195 improve tutorial notebook header boilerplate
#234
gselzer
closed
2 years ago
3
Preserve image metadata in xarray <-> Dataset conversions
#233
gselzer
closed
2 years ago
1
Propagate image name/title when converting xarray ⇆ Dataset or ImagePlus
#232
ctrueden
closed
2 years ago
1
Add to_xarray() method and various related code improvements
#231
elevans
closed
2 years ago
2
Using function constructed with pyimagej inside for loop fails
#230
brunocalet
closed
2 years ago
2
Petition for Discussions Tab
#229
jmdelahanty
closed
2 years ago
2
Can I allocate less memory for imagej than it is initially requested?
#228
tornikepirveli
closed
2 years ago
15
Clean up PyImageJ conversion functions
#227
ctrueden
closed
2 years ago
6
Slicing `net.imagej.Dataset` returns an `IntervalView` which does not support dimension metadata
#226
elevans
opened
2 years ago
1
Static versioning and build improvements
#225
gselzer
closed
2 years ago
4
Installing pyimagej
#224
adamcc
closed
2 years ago
6
Is it possible to use ThunderSTORM plugin with pyimageJ?
#223
tornikepirveli
closed
2 years ago
2
Iniatializing SNT from maven endpoints
#222
tferr
closed
2 years ago
8
Failed to bootstrap the artifact / Full Maven error output
#220
lsdanttas
closed
1 year ago
3
WARNING: An illegal reflective access operation has occurred
#219
jaredbrewer
closed
2 years ago
5
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