iobio vcf.iobio.io issues

iobio / vcf.iobio.io

MIT License

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issues

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Allele Frequency Spectrum always 50%

#74 shwivel closed 9 months ago
7
mosaic integration - experiment id

#73 adityaekawade closed 3 years ago
0
update mosaic api for sample files

#72 adityaekawade closed 3 years ago
0
fix: load button disabled for local file with no samples

#71 adityaekawade closed 3 years ago
0
changing to newest version of mosaic api

#70 WilliamRichards2017 closed 4 years ago
0
Bump debug from 0.7.4 to 4.1.1 in /components/socket.io

#69 dependabot[bot] opened 4 years ago
0
Bump superagent from 0.17.0 to 5.2.2 in /components/socket.io

#68 dependabot[bot] opened 4 years ago
0
Update for gru

#67 anderspitman closed 4 years ago
1
Bump express from 3.4.8 to 4.17.1 in /components/socket.io/examples/chat

#66 dependabot[bot] opened 4 years ago
0
Not specified' species

#65 adityaekawade closed 5 years ago
0
Species and genome build selection

#64 adityaekawade closed 5 years ago
0
Ability to deploy on server

#63 awhipp closed 5 years ago
2
Non-Model Organism Visualization

#62 C-Pauli opened 5 years ago
19
Local vcf for HIV not loading

#61 tonydisera opened 6 years ago
0
Fix bug of vcf file upload with build selected

#60 adityaekawade closed 6 years ago
0
Feature samples selection

#59 adityaekawade closed 6 years ago
13
Specifying tbi index URL stopped working

#58 MariaNattestad closed 6 years ago
9
y-scale on variant type chart

#57 AlistairNWard opened 6 years ago
0
Mark centromeric / telomeric regions

#56 AlistairNWard opened 6 years ago
0
Upsampling before original sampling is complete

#55 AlistairNWard opened 6 years ago
0
Add number of transitions and transversions in bars for Ts/Tv ratio

#54 AlistairNWard opened 6 years ago
0
Add labels to all charts

#53 AlistairNWard opened 6 years ago
0
Add help modals

#52 AlistairNWard opened 6 years ago
0
Filter samples X out doesn't work

#51 AlistairNWard closed 6 years ago
1
Add button for GRCh38 bed

#50 AlistairNWard opened 6 years ago
0
Default reference is unintentionally GRCh37

#49 AlistairNWard opened 6 years ago
0
Selecting reference genome is weird

#48 AlistairNWard opened 6 years ago
0
Visual for samples

#47 AlistairNWard opened 6 years ago
0
Add a visual tutorial?

#46 AlistairNWard opened 6 years ago
0
Explain variant density

#45 AlistairNWard opened 6 years ago
0
Add info buttons

#44 AlistairNWard closed 6 years ago
1
Reword instructions for .tbi URL so that user only enters when .tbi resides in different location

#43 tonydisera closed 6 years ago
0
Flagging variants for NOT PASSING FILTER CRITERIA is inconsistent.

#42 tonydisera closed 7 years ago
0
Have vcf.iobio automatically detect which genome version your data is

#41 mvelinder closed 6 years ago
1
Quality score distribution

#40 AlistairNWard opened 7 years ago
7
Local file problems

#39 AlistairNWard opened 7 years ago
1
Add working wheel to home page

#38 AlistairNWard opened 7 years ago
4
Filtering on samples doesn't seem to work

#37 AlistairNWard closed 6 years ago
4
Indicate expected base changes

#36 AlistairNWard opened 7 years ago
0
Zoom doesn't seem to work

#35 AlistairNWard closed 7 years ago
0
Display amino acid change (from HGVSp notation) on tooltip by ref->alt nt change

#34 tonydisera closed 7 years ago
0
Add typeahead dropdown to pieChooser

#33 tonydisera opened 8 years ago
0
Convert chromosome picker to iobio.viz

#32 tonydisera closed 6 years ago
0
Error in index file nref=0

#31 AlistairNWard opened 8 years ago
1
Error with filenames should be handled

#30 AlistairNWard closed 8 years ago
3
AF calculation

#29 tonydisera opened 8 years ago
6
Reference length error

#28 AlistairNWard closed 8 years ago
3
Variant density dropoff shown as slope for genome (all references) view.

#27 tonydisera closed 8 years ago
3
Sort out test files

#26 AlistairNWard opened 8 years ago
0
Reference genomes

#25 AlistairNWard opened 8 years ago
0