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jcrozum
/
biobalm
The biologist's Boolean attractor landscape mapper, building Waddington landscapes from Boolean networks.
https://jcrozum.github.io/biobalm/
MIT License
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pruned redundant paths in control succession search
#128
jcrozum
closed
3 hours ago
5
Further DNF optimizations
#127
daemontus
opened
2 days ago
0
Minor things to tidy up
#126
jcrozum
opened
1 week ago
0
Skip nodes
#125
daemontus
closed
1 week ago
1
Alternative two-way reachability method
#124
daemontus
closed
3 weeks ago
2
Add a fallback to the fully symbolic attractor detection if the NFVS search fails
#123
daemontus
closed
1 month ago
1
Fast-forward source node expansion anywhere in the succession diagram
#122
daemontus
closed
1 month ago
3
Expansion limits
#121
daemontus
closed
1 month ago
2
Remove duplicate computation from block expansion
#120
daemontus
closed
1 month ago
2
Block (scc) expansion
#119
daemontus
closed
3 months ago
3
Refactor SCC expansion
#118
daemontus
closed
3 months ago
1
SCC Expansion Bug
#117
jcrozum
closed
3 months ago
1
Attractor detection refactoring
#116
daemontus
closed
5 months ago
6
Release setup
#115
jcrozum
closed
5 months ago
2
Our package name is scooped!
#114
jcrozum
closed
5 months ago
9
Add License
#113
jcrozum
closed
5 months ago
2
Organize SCC expansion module
#112
jcrozum
closed
6 months ago
1
Minor docs updates
#111
daemontus
closed
6 months ago
2
Space state docs
#110
jcrozum
closed
6 months ago
3
Petri net docs
#109
jcrozum
closed
6 months ago
1
added docs for trappist_core module
#108
jcrozum
closed
6 months ago
2
Motif avoidant docs
#107
jcrozum
closed
6 months ago
2
Succession api and docs
#106
jcrozum
closed
6 months ago
1
add recent changes from main
#105
jcrozum
closed
7 months ago
1
Interaction graph docs
#104
jcrozum
closed
7 months ago
2
Infer a valid influence graph instead of erasing it.
#103
daemontus
closed
7 months ago
1
AEON FVS parity option seems to have no effect
#102
jcrozum
closed
7 months ago
7
Control and drivers docs
#101
jcrozum
closed
7 months ago
3
Drivers docs
#100
jcrozum
closed
7 months ago
2
mole site down
#99
jcrozum
closed
5 months ago
3
Documentation pipeline
#98
jcrozum
closed
7 months ago
4
remove analysis and random models
#97
kyuhyongpark
closed
7 months ago
1
Succession diagram exposure
#96
jcrozum
closed
7 months ago
2
Balm goes brrrrrr
#95
daemontus
closed
7 months ago
3
Aeon 1.0
#94
daemontus
closed
8 months ago
4
Simplify `SuccessionDiagram` API
#93
jcrozum
opened
8 months ago
2
Move analysis to separate repository
#92
jcrozum
closed
7 months ago
6
Standardize documentation
#91
jcrozum
opened
8 months ago
6
Unused code
#90
jcrozum
closed
9 months ago
2
Clean up repository
#89
jcrozum
closed
9 months ago
0
Usability improvments
#88
jcrozum
closed
9 months ago
3
rename package to balm
#87
jcrozum
closed
9 months ago
2
Percolation optimizations
#86
jcrozum
closed
9 months ago
3
AEON stubs outdated?
#85
jcrozum
closed
7 months ago
5
Percolation is very slow
#84
jcrozum
closed
7 months ago
12
fix edge motifs (back-merge)
#83
jcrozum
closed
10 months ago
1
Remaining tasks to run
#82
kyuhyongpark
closed
7 months ago
2
User friendliness improvements
#81
jcrozum
closed
9 months ago
5
Control optimization
#80
jcrozum
opened
10 months ago
2
Source SCC based expansion
#79
kyuhyongpark
closed
9 months ago
15
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