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josefin-werme
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LAVA
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How many SNPs in a summary statistics file are needed to ensure enough power?
#83
thanhle809
opened
6 days ago
0
LAVA for multiple ancestries
#82
kruthikaiyer0990
opened
3 weeks ago
1
Inversion Error
#81
emrahkacar
closed
6 days ago
0
Error in quantile.default(V, 0.5): missing values and NaN's not allowed if 'na.rm' is FALSE
#80
seoyoung504
closed
2 weeks ago
0
Global rg and local rg
#79
dqq0404
closed
1 month ago
2
All estimates are NA
#78
Huifang-Xu
opened
1 month ago
1
GWAS dataset filtering for LAVA
#77
zara03
closed
1 month ago
1
trouble processing loci for analysis
#76
SBNeuro1
closed
1 month ago
0
Unaligned SNPs and sumstat loading in LAVA
#75
SBNeuro1
closed
1 month ago
4
Invalid target phenotype specified
#74
dqq0404
closed
5 months ago
2
total N or effect N
#73
dqq0404
closed
6 months ago
2
about the WARNNINGS
#72
Licun1
closed
1 month ago
1
run.multireg(param.lim) Warning: Estimates too far out of bounds
#71
EPTissink
closed
7 months ago
2
LD BLOCKS
#70
zara03
closed
7 months ago
0
Can rg be 1?
#69
dqq0404
closed
7 months ago
2
How to analyze all loci togather in R
#68
zara03
closed
6 months ago
1
HG38 BUILD LOCUS FILE
#67
zara03
closed
6 months ago
3
Error from “blocks_s2500_m25_f1_w200.GRCh37_hg19.locfile”
#66
lzxwsq
closed
7 months ago
1
Discordant results between LAVA and LDSC
#65
actright7
closed
7 months ago
2
Error: Invalid target phenotype specified
#63
zakathornton
closed
8 months ago
1
Negative variance estimate for all phenotypes
#62
chenyangjjj
closed
10 months ago
0
Couldn't open input file
#61
zakathornton
closed
10 months ago
0
Estimate global h2 and rg
#60
PDRohde
closed
1 year ago
1
How can I analysis the entire genome
#59
littlehegemon
closed
1 year ago
1
There is a question about the analysis process.
#58
Zhangzzzzzy
closed
1 year ago
2
vignettes/data/data/asthma.sumatats.txt can not be shown
#57
XuanxiaoLi
closed
1 year ago
2
unable to compile lava-partitioning
#56
catheriz
closed
1 year ago
0
No valid N header in sumstats file for phenotype
#55
catheriz
closed
1 year ago
0
Ref: Model does not converge #52
#54
ancolococky
closed
1 year ago
3
Partial correlations
#53
NicolasC0
closed
1 year ago
2
Model does not converge
#52
karpat90
closed
1 year ago
1
Regarding sample size for case -control GWAS
#51
karpat90
closed
1 year ago
3
Update README
#50
cadeleeuw
closed
1 year ago
0
Update README
#49
cadeleeuw
closed
1 year ago
0
r2.lower, r2.upper, lo.lower and lo.upper are NA
#48
shenlan17
closed
1 year ago
1
Zero p-values in run.univ at non GWAS significant loci.
#47
gouthamatla
closed
1 year ago
1
locus file problem
#46
cwnag-c
closed
1 year ago
2
Errors in the analysis of conditional genetic relations
#45
zsf123525
closed
1 year ago
2
Unable to run with target phenotype if negative variance present in any loci.
#44
RubyWoodward
closed
1 year ago
6
installation problem
#43
biostat0903
closed
1 year ago
1
Unable to run particular target in run.uni.bivar
#42
RubyWoodward
closed
1 year ago
2
Negative variance issue
#41
henry-jo98
closed
1 year ago
1
process.locus error: missing value where TRUE/FALSE needed
#40
laurendonoghue
closed
1 year ago
0
SNP filter
#39
AlexYiLuo
closed
1 year ago
4
Possibility to use a less strict P value threshold for univariate analysis
#38
liviamotu
closed
2 years ago
2
Error from process.locus() for test data analysis
#37
Guo00158
closed
2 years ago
1
Retrieve genes from a locus by knowing the chromosome position
#36
zh-zhang1984
closed
1 year ago
1
Error in if (any(out.of.bounds)) : missing value where TRUE/FALSE needed
#35
bobbykoeleman
closed
2 years ago
2
redefine loci based on the 1000G data
#34
sherryfan030
closed
2 years ago
1
Update dev text
#33
cadeleeuw
closed
2 years ago
0
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