josephdviviano epitome issues

josephdviviano / epitome

scriptit modules for fmri analysis

Other

9 stars 6 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

filter order

#59 colinhawco closed 7 years ago
2
MODULE: linreg_fs2epi_fsl typo

#58 colinhawco closed 7 years ago
1
McRetroTS error

#57 colinhawco opened 7 years ago
11
Bug fix: interp falling back to drop caused np.reshape to fail

#56 DESm1th closed 7 years ago
1
epi-genregress fails on some subjects

#55 josephdviviano closed 7 years ago
2
epi-genregress SVD did not converge

#54 josephdviviano closed 7 years ago
2
need a way to regress mean signal from GM.

#53 josephdviviano closed 7 years ago
1
epi-randomize and covariate interactions

#52 colinhawco closed 7 years ago
1
fs-export won't run

#51 colinhawco closed 7 years ago
2
Unable to run epitome on Sharcnet

#50 jaegerl closed 8 years ago
1
make init_epi_copy

#49 josephdviviano closed 7 years ago
1
make calc_headmotion module

#48 josephdviviano closed 7 years ago
1
break deskulling out of motion-deskull

#47 josephdviviano closed 7 years ago
1
autobox should change the size of the mask

#46 josephdviviano closed 7 years ago
1
write 3dAutobox module

#45 josephdviviano closed 8 years ago
0
Here's the more stuff

#44 edickie closed 8 years ago
0
make a seperate calc DVARS module

#43 josephdviviano closed 8 years ago
1
Dev

#42 josephdviviano closed 8 years ago
0
Freesurfer to MNI

#41 colinhawco closed 8 years ago
1
The big merge

#40 edickie closed 8 years ago
0
Missing matlab library for physio

#39 josephdviviano closed 8 years ago
1
matlab libraries linking problem

#38 josephdviviano closed 8 years ago
4
add MIPAV and cbs tools as an alternative to freesurfer

#37 josephdviviano closed 8 years ago
1
add fieldmap module

#36 josephdviviano closed 8 years ago
1
T1 template wasn't copied into my epitome copy..

#35 edickie closed 8 years ago
6
installation funness

#34 edickie closed 8 years ago
2
Bug: linreg_fs2epi_fsl failes if it is run after nonlinreg_calc_fsl

#33 colinhawco closed 7 years ago
2
anat_smoothmask conflicts across runs of epitome.

#32 josephdviviano closed 9 years ago
1
epi-regtarget should be derrived from anat_MNI

#31 josephdviviano closed 9 years ago
0
AFNI and FSL reg mask names need to be unified

#30 josephdviviano closed 9 years ago
0
nonlinreg_AFNI is broken

#29 josephdviviano closed 7 years ago
2
break init_epi into a set of modules:

#28 josephdviviano closed 8 years ago
1
replace 3dtshift with slicetimer from fsl

#27 josephdviviano closed 7 years ago
1
make AFNI less chatty when things are going well

#26 josephdviviano closed 8 years ago
1
Investigate CMTK

#25 josephdviviano closed 7 years ago
0
We need ANTS registration modules.

#24 josephdviviano closed 7 years ago
0
epitome failed for IMOB during registrations

#23 colinhawco closed 9 years ago
9
Dev

#22 josephdviviano closed 9 years ago
0
work in these methods

#21 josephdviviano closed 9 years ago
0
qc_motionind is broken -- 'no such file or directory'

#20 josephdviviano closed 9 years ago
1
epi-queue fails to submit any 'cmd' scripts if the proclist does not contain any qc calls.

#19 josephdviviano closed 9 years ago
1
'volsmooth' module breaking down

#18 aigoyal closed 9 years ago
1
Pulling updated epitome - 30 March, 2015

#17 aigoyal closed 9 years ago
0
linreg_AFNI relies on the /tmp directory and this causes conflicts in the queue

#16 josephdviviano closed 9 years ago
1
epitome clean is broken

#15 josephdviviano closed 9 years ago
1
Pulling updated epitome - 19 March, 2015

#14 aigoyal closed 9 years ago
0
Include epitome script in nifti header

#13 josephdviviano closed 7 years ago
1
Dev

#12 josephdviviano closed 9 years ago
0
A couple of questions about epitome

#11 aigoyal closed 9 years ago
1
Not running FreeSurfer pipeline

#10 naailk closed 9 years ago
4