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josephdviviano
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epitome
scriptit modules for fmri analysis
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#59
colinhawco
closed
7 years ago
2
MODULE: linreg_fs2epi_fsl typo
#58
colinhawco
closed
7 years ago
1
McRetroTS error
#57
colinhawco
opened
7 years ago
11
Bug fix: interp falling back to drop caused np.reshape to fail
#56
DESm1th
closed
7 years ago
1
epi-genregress fails on some subjects
#55
josephdviviano
closed
7 years ago
2
epi-genregress SVD did not converge
#54
josephdviviano
closed
8 years ago
2
need a way to regress mean signal from GM.
#53
josephdviviano
closed
8 years ago
1
epi-randomize and covariate interactions
#52
colinhawco
closed
8 years ago
1
fs-export won't run
#51
colinhawco
closed
8 years ago
2
Unable to run epitome on Sharcnet
#50
jaegerl
closed
8 years ago
1
make init_epi_copy
#49
josephdviviano
closed
8 years ago
1
make calc_headmotion module
#48
josephdviviano
closed
8 years ago
1
break deskulling out of motion-deskull
#47
josephdviviano
closed
8 years ago
1
autobox should change the size of the mask
#46
josephdviviano
closed
8 years ago
1
write 3dAutobox module
#45
josephdviviano
closed
8 years ago
0
Here's the more stuff
#44
edickie
closed
8 years ago
0
make a seperate calc DVARS module
#43
josephdviviano
closed
8 years ago
1
Dev
#42
josephdviviano
closed
8 years ago
0
Freesurfer to MNI
#41
colinhawco
closed
8 years ago
1
The big merge
#40
edickie
closed
8 years ago
0
Missing matlab library for physio
#39
josephdviviano
closed
8 years ago
1
matlab libraries linking problem
#38
josephdviviano
closed
8 years ago
4
add MIPAV and cbs tools as an alternative to freesurfer
#37
josephdviviano
closed
8 years ago
1
add fieldmap module
#36
josephdviviano
closed
8 years ago
1
T1 template wasn't copied into my epitome copy..
#35
edickie
closed
9 years ago
6
installation funness
#34
edickie
closed
9 years ago
2
Bug: linreg_fs2epi_fsl failes if it is run after nonlinreg_calc_fsl
#33
colinhawco
closed
8 years ago
2
anat_smoothmask conflicts across runs of epitome.
#32
josephdviviano
closed
9 years ago
1
epi-regtarget should be derrived from anat_MNI
#31
josephdviviano
closed
9 years ago
0
AFNI and FSL reg mask names need to be unified
#30
josephdviviano
closed
9 years ago
0
nonlinreg_AFNI is broken
#29
josephdviviano
closed
8 years ago
2
break init_epi into a set of modules:
#28
josephdviviano
closed
8 years ago
1
replace 3dtshift with slicetimer from fsl
#27
josephdviviano
closed
8 years ago
1
make AFNI less chatty when things are going well
#26
josephdviviano
closed
8 years ago
1
Investigate CMTK
#25
josephdviviano
closed
8 years ago
0
We need ANTS registration modules.
#24
josephdviviano
closed
8 years ago
0
epitome failed for IMOB during registrations
#23
colinhawco
closed
9 years ago
9
Dev
#22
josephdviviano
closed
9 years ago
0
work in these methods
#21
josephdviviano
closed
9 years ago
0
qc_motionind is broken -- 'no such file or directory'
#20
josephdviviano
closed
9 years ago
1
epi-queue fails to submit any 'cmd' scripts if the proclist does not contain any qc calls.
#19
josephdviviano
closed
9 years ago
1
'volsmooth' module breaking down
#18
aigoyal
closed
9 years ago
1
Pulling updated epitome - 30 March, 2015
#17
aigoyal
closed
9 years ago
0
linreg_AFNI relies on the /tmp directory and this causes conflicts in the queue
#16
josephdviviano
closed
9 years ago
1
epitome clean is broken
#15
josephdviviano
closed
9 years ago
1
Pulling updated epitome - 19 March, 2015
#14
aigoyal
closed
9 years ago
0
Include epitome script in nifti header
#13
josephdviviano
closed
8 years ago
1
Dev
#12
josephdviviano
closed
9 years ago
0
A couple of questions about epitome
#11
aigoyal
closed
9 years ago
1
Not running FreeSurfer pipeline
#10
naailk
closed
9 years ago
4
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