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jr-leary7
/
scLANE
Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
MIT License
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added summarization for GLMM mode -- closes #188
#194
jr-leary7
closed
2 weeks ago
0
Dev
#193
jr-leary7
closed
2 weeks ago
0
Dev
#192
jr-leary7
closed
3 weeks ago
0
finally fixed sorting fn
#191
jr-leary7
closed
2 months ago
0
Dev
#190
jr-leary7
closed
2 months ago
0
Add ability to compare between treat or condition groups
#189
jr-leary7
opened
3 months ago
0
Add function that collates all slopes & ranges to a query-able table
#188
jr-leary7
closed
2 weeks ago
0
Dev
#187
jr-leary7
closed
3 months ago
0
Add function to cleverly sort data by IDs and pseudotime for GEE / GLMM modes
#186
jr-leary7
closed
3 months ago
0
Dev
#185
jr-leary7
closed
4 months ago
0
Dev
#184
jr-leary7
closed
6 months ago
0
Add function to test significance of gene program score across trajectory
#183
jr-leary7
closed
6 months ago
0
added parallel processing to geneProgramDrivers
#182
jr-leary7
closed
6 months ago
0
Add parallelism to `geneProgramDrivers()`
#181
jr-leary7
closed
6 months ago
1
git recache
#180
jr-leary7
closed
6 months ago
0
bumped to 0.7.9
#179
jr-leary7
closed
6 months ago
0
Dev
#178
jr-leary7
closed
6 months ago
0
Dev
#177
jr-leary7
closed
6 months ago
0
added CI/CD to dev branch -- closes #175
#176
jr-leary7
closed
7 months ago
0
Add CI/CD checks to dev branch as well as main
#175
jr-leary7
closed
7 months ago
0
Dev
#174
jr-leary7
closed
7 months ago
0
Dev
#173
jr-leary7
closed
7 months ago
1
Dev
#172
jr-leary7
closed
7 months ago
0
changed R CMD check workflow etc
#171
jr-leary7
closed
7 months ago
0
Dev
#170
jr-leary7
closed
7 months ago
0
Dev
#169
jr-leary7
closed
7 months ago
0
fixed knot selection via reversion to old null model scoring method
#168
jr-leary7
closed
7 months ago
0
Dev
#167
jr-leary7
closed
7 months ago
0
Add function to correlate expression with gene program scores
#166
jr-leary7
closed
6 months ago
0
test
#165
jr-leary7
closed
7 months ago
0
Investigate possibility of adding progress bar to main loop in `testDynamic()`
#164
jr-leary7
closed
7 months ago
0
add per-gene time tracking to `testDynamic()`
#163
jr-leary7
closed
7 months ago
0
Dev
#162
jr-leary7
closed
7 months ago
0
Dev
#161
jr-leary7
closed
7 months ago
0
still trying to resolve CI/CD issues ugh
#160
jr-leary7
closed
7 months ago
0
CI/CD tweaks & better test dataset compression
#159
jr-leary7
closed
7 months ago
0
Dev
#158
jr-leary7
closed
7 months ago
0
Dev
#157
jr-leary7
closed
7 months ago
0
Dev
#156
jr-leary7
closed
7 months ago
0
Dev
#155
jr-leary7
closed
7 months ago
0
Dev
#154
jr-leary7
closed
7 months ago
0
slimmed down README
#153
jr-leary7
closed
7 months ago
0
hopefully fixed R CMD check error
#152
jr-leary7
closed
8 months ago
0
Add S3 method `summary.scLANE()`
#151
jr-leary7
opened
8 months ago
0
v0.7.7 -- fixed R CMD check errors and updated README
#150
jr-leary7
closed
8 months ago
0
added dataset -- closes #148
#149
jr-leary7
closed
8 months ago
0
Include simulated dataset as part of package
#148
jr-leary7
closed
8 months ago
1
still fixing CI/CD bugssssss -- references #144
#147
jr-leary7
closed
8 months ago
0
still fixing CI/CD bugs -- again attempting #144
#146
jr-leary7
closed
8 months ago
0
fixing CI/CD bugs -- closes #144
#145
jr-leary7
closed
8 months ago
0
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