junyangq snpnet issues - Githubissues

junyangq / snpnet

snpnet: Fast and scalable lasso/elastic-net solver for large SNP data

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Corr

#42 ChrisTho23 closed 2 months ago
0
How run snpnet without penalizing covariates?

#41 annilk opened 3 months ago
0
Is there any application of BASIL on non-SNP data?

#40 WeiCSong opened 2 years ago
0
Error: Problem with `mutate()` column `stats_means`.

#39 julibeg opened 3 years ago
0
gfortran error: Bad CPU type in executable

#38 garyzhubc closed 3 years ago
2
Memory issues

#37 privefl opened 3 years ago
7
Invalid --memory argument (with negative value).

#36 privefl opened 3 years ago
0
LD pruning

#35 gustavahlberg opened 4 years ago
0
Can snpnet be used on bed files directly?

#34 privefl closed 3 years ago
7
Update functions.R

#33 marivascruz closed 4 years ago
0
Add elastic-net support

#32 junyangq closed 4 years ago
0
Error running vignette

#31 P-Rafter closed 2 years ago
3
`compute.summary.stats`

#30 yk-tanigawa closed 4 years ago
0
Accelerate computeStats with plink2 --geno-counts

#29 yk-tanigawa closed 4 years ago
0
Update snpnet.R

#28 yk-tanigawa closed 4 years ago
1
license of the package

#27 NKweiwang closed 5 years ago
1
UKB pipeline

#26 mxcai opened 5 years ago
1
Fix predict function used in glmnet/Plus

#25 junyangq closed 5 years ago
0
Change to a more standard format FID and IID

#24 junyangq closed 5 years ago
0
Remove chunkSize and import Rcpp

#23 junyangq closed 5 years ago
0
Update package doc

#22 junyangq closed 5 years ago
0
Fix documentation and description file

#21 junyangq closed 5 years ago
0
Improved output messages and documentation

#20 junyangq closed 5 years ago
0
update snpnet.R to check early stopping condition immediately after l…

#19 yk-tanigawa closed 4 years ago
1
Early stopping with --prevIter

#18 yk-tanigawa closed 4 years ago
1
Fix empty covariate and prevIter > 0

#17 junyangq closed 5 years ago
0
Update snpnet.R -- a patch for issue:

#16 yk-tanigawa closed 5 years ago
1
`--prevIter` option does not work when covariates are empty list and specify validation set

#15 yk-tanigawa closed 5 years ago
3
Update snpnet.R

#14 yk-tanigawa closed 5 years ago
0
Fix issue of empty covariates and add aggressive KKT check

#13 junyangq closed 5 years ago
0
bugfix: glm function predict does not accept data frame or data table…

#12 yk-tanigawa closed 5 years ago
0
Apply a minor update

#11 yk-tanigawa closed 5 years ago
1
Update codes & sample data

#10 yk-tanigawa closed 5 years ago
1
Update BEDMatrixPlus.cpp

#9 yk-tanigawa closed 5 years ago
0
Update snpnet.R

#8 yk-tanigawa closed 5 years ago
0
Update snpnet.R (file.path instead of paste0)

#7 yk-tanigawa closed 5 years ago
1
Both FID and IID should be used for identifier for individuals

#6 yk-tanigawa closed 5 years ago
1
Speed up matrix multiplication

#5 junyangq closed 5 years ago
0
Update DESCRIPTION

#4 yk-tanigawa closed 5 years ago
0
Update .gitignore

#3 yk-tanigawa closed 5 years ago
0
change .gitignore

#2 junyangq closed 5 years ago
0
Remove dependency on a modified version of BEDMatrix

#1 junyangq closed 5 years ago
0