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kalenkovich
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reproducible-MEEG
Code that attempts to reproduce "A Reproducible MEG/EEG Group Study With the MNE Software" by Jas et al., 2018
MIT License
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switch to Python 3.7
#37
kalenkovich
closed
2 years ago
0
finishing up before sending supplementary materials
#36
kalenkovich
closed
2 years ago
0
[mrg] added source plots
#35
kalenkovich
closed
2 years ago
0
update README.MD
#34
kalenkovich
opened
2 years ago
2
Multiple smaller issues
#33
kalenkovich
closed
2 years ago
0
get rid of openfmri subject codes
#32
kalenkovich
closed
2 years ago
0
steps 14-16: group average dSPM results, run LCMV
#31
kalenkovich
closed
2 years ago
0
add souce reconstruction figures to report
#30
kalenkovich
closed
2 years ago
0
evokeds should end with evo, not ave - for mne-python to be happy
#29
kalenkovich
closed
2 years ago
1
add environment-full.yml
#28
kalenkovich
closed
2 years ago
0
move the "quotes within strings" issue from "Applying ..." to "Tools: Snakemake: Matlab"
#27
kalenkovich
opened
2 years ago
0
add rmarkdown report
#26
kalenkovich
closed
2 years ago
0
finish inverse modeling and check related in chapter 3
#25
kalenkovich
closed
2 years ago
1
recode and upload freesurefer outputs
#24
kalenkovich
closed
2 years ago
0
ica template shoud have "_ica" suffix, not "_filtered"
#23
kalenkovich
closed
2 years ago
0
step 10
#22
kalenkovich
opened
3 years ago
1
steps 14-16
#21
kalenkovich
closed
2 years ago
1
add r-markdown
#20
kalenkovich
closed
2 years ago
0
describe the step when freesurfer was run and where to store outputs
#19
levchenkoegor
closed
2 years ago
1
[fix] pin smart_open version to 3
#18
kalenkovich
closed
3 years ago
3
ImportError: cannot import name 'parse_uri' from 'smart_open'
#17
kalenkovich
closed
3 years ago
2
step 13 make and apply inverse models
#16
kalenkovich
closed
3 years ago
1
step 12: make forward models
#15
kalenkovich
closed
3 years ago
1
[pending] step 11: group average sensors
#14
kalenkovich
closed
3 years ago
1
consider downloading using openneuro-py
#13
kalenkovich
opened
3 years ago
0
rule for recon
#12
kalenkovich
closed
2 years ago
1
evoked, covariance, and tft (steps 7-9)
#11
kalenkovich
closed
3 years ago
1
[pending] clean epochs by removing bad ICA components and noisy epochs
#10
kalenkovich
closed
3 years ago
2
[pending] epoch data (no cleaning)
#9
kalenkovich
closed
3 years ago
1
clean the paths
#8
kalenkovich
opened
3 years ago
1
remove '-' from environment variable reproducible-data
#7
kalenkovich
closed
2 years ago
0
check out snakemake GUI
#6
kalenkovich
closed
3 years ago
1
draw snakemake workflow tree
#5
kalenkovich
closed
2 years ago
0
run ica
#4
kalenkovich
closed
3 years ago
2
download data from openneuro instead of openfmri
#3
kalenkovich
closed
3 years ago
3
can't run Raw.filter with multiple cores
#2
kalenkovich
opened
3 years ago
6
how to delete files after chaning names
#1
kalenkovich
opened
3 years ago
0