issues
search
katylettuce
/
beast-mcmc
Automatically exported from code.google.com/p/beast-mcmc
0
stars
0
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
CodonPartitionedRobustCounting gives Array Out Of Bounds Exception if codon position pattern lists are different sizes
#613
GoogleCodeExporter
opened
9 years ago
1
BEAUTi robust counting XML was not overriding the default stripping of ambiguous sites.
#612
GoogleCodeExporter
closed
9 years ago
0
BEAUti misnames the rates log file for BSSVS
#611
GoogleCodeExporter
closed
9 years ago
1
Issue with using Random Local Clocks with -beagle_instances option.
#610
GoogleCodeExporter
opened
9 years ago
0
BEAUti duplicate prefix issue for multi-partition
#609
GoogleCodeExporter
closed
9 years ago
4
Beauti 1.7.0 bug regarding user-specified tree
#608
GoogleCodeExporter
closed
9 years ago
3
Beauti 1.7.0 bug regarding estimating clock rates
#607
GoogleCodeExporter
closed
9 years ago
3
beauti 1.7.bug regarding estimated clock rates
#606
GoogleCodeExporter
closed
9 years ago
1
BEAUti complains about missing values in traits files
#605
GoogleCodeExporter
closed
9 years ago
1
RealNumberField FocusListener in prior dialog makes many popups
#604
GoogleCodeExporter
closed
9 years ago
1
BEAUti prior dialog not validate truncation and uniform bound and offset
#603
GoogleCodeExporter
closed
9 years ago
1
BEAUti prior dialog crashes if choose Laplace
#602
GoogleCodeExporter
closed
9 years ago
1
Markov Jumps counting of state changes wasn't generating correct XML
#601
GoogleCodeExporter
closed
9 years ago
1
Truncation of prior distribution not interoperating with offset prior distribution
#600
GoogleCodeExporter
closed
9 years ago
1
Robust counting of dN/dS was producing incorrect XML
#599
GoogleCodeExporter
closed
9 years ago
1
BEAUti prior plot crashes given offset
#598
GoogleCodeExporter
closed
9 years ago
1
Use of -beagle_instances is broken in BEAST 1.7
#597
GoogleCodeExporter
closed
9 years ago
1
BEAGLE performance has been degraded by choice of default scaling option
#596
GoogleCodeExporter
closed
9 years ago
1
BEAUti: Markov jump state reconstruction not pushed to XML
#595
GoogleCodeExporter
closed
9 years ago
2
BEAUti 1.7 has a redundant and non-functional Sequence Error Model popup menu in SiteModelPanel
#594
GoogleCodeExporter
closed
9 years ago
1
TruncatedDistribution throw UnsupportedOperationException for mean and variance
#593
GoogleCodeExporter
closed
9 years ago
1
BEAUti tmrca name is not updated in prior panel if changing its name in taxon set panel
#592
GoogleCodeExporter
closed
9 years ago
1
BEAUti prior dialog Truncated fields do not have correct validation regarding parameter bounds
#591
GoogleCodeExporter
closed
9 years ago
3
BEAUti prior dialog GUI logic bug
#590
GoogleCodeExporter
closed
9 years ago
1
BEAUti lost Uniform bound validation
#589
GoogleCodeExporter
closed
9 years ago
1
Validation not working properly for PriorDialog
#588
GoogleCodeExporter
closed
9 years ago
2
BEAUti prior dialog ignores validation in the text field if pressing Enter key
#587
GoogleCodeExporter
closed
9 years ago
1
BEAUti prior dialog Cancel not working
#586
GoogleCodeExporter
closed
9 years ago
1
BEAUti keep getting "No leaf nodes selected" error message
#585
GoogleCodeExporter
closed
9 years ago
2
BEAUti prior dialog validation bugs
#584
GoogleCodeExporter
closed
9 years ago
3
BEAUti prior dialog text field validation should give sensible error message
#583
GoogleCodeExporter
closed
9 years ago
1
BEAUti Species Set cannot revert back to Taxon Set if uncheck *BEAST
#582
GoogleCodeExporter
closed
9 years ago
1
BEAUti prior dialog cannot accept 0 for typing 0.???
#581
GoogleCodeExporter
closed
9 years ago
5
BEAUti *BEAST did not check the empty species value
#580
GoogleCodeExporter
closed
9 years ago
1
BEAUti : empty species set is created in *BEAST
#579
GoogleCodeExporter
closed
9 years ago
1
Add BEAST MC3 dialog and make it available in BEAST release package
#578
GoogleCodeExporter
closed
9 years ago
1
BEAUti generator for *BEAST + calibrated Yule is broken
#577
GoogleCodeExporter
closed
9 years ago
1
BEAUti calibrated Yule validation is missing one logic
#576
GoogleCodeExporter
closed
9 years ago
1
BEUAti should check for '--' in generated XML comments.
#575
GoogleCodeExporter
closed
9 years ago
1
beauti generates an incorrect prior specification
#574
GoogleCodeExporter
closed
9 years ago
6
BEAUti taxon set panel taxon set table incorrectly auto selection
#573
GoogleCodeExporter
closed
9 years ago
1
BEAUti tmrca gives wrong prefix
#572
GoogleCodeExporter
closed
9 years ago
1
TN93 substitution model
#571
GoogleCodeExporter
closed
9 years ago
7
bug of unique attribute in pattern lists
#570
GoogleCodeExporter
closed
9 years ago
1
BirthDeathEpidemiologyModel bug
#569
GoogleCodeExporter
closed
9 years ago
6
same pattern id given to two different partitions
#568
GoogleCodeExporter
closed
9 years ago
2
Error when running an xml after changing some calibrations
#567
GoogleCodeExporter
closed
9 years ago
1
Tracer does not update y-axis properly for multiple traces
#566
GoogleCodeExporter
opened
9 years ago
2
hasIdenticalTaxa(List<AbstractPartitionData> partitionDataList) gives wrong boolean
#565
GoogleCodeExporter
closed
9 years ago
1
kCGErrorIllegalArgument when running BEAST
#564
GoogleCodeExporter
closed
9 years ago
1
Previous
Next