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kbaseapps
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kb_uploadmethods
MIT License
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PUBLIC-2378 update docs links, link targets
#356
briehl
opened
1 year ago
1
Add CodeQL workflow for GitHub code scanning
#355
lgtm-com[bot]
opened
2 years ago
1
Making genome_refs optional for sequence set upload
#354
cshenry
closed
2 years ago
1
active fast to sequence app
#353
Tianhao-Gu
closed
2 years ago
1
Adding apps and utilities to support upload of FASTA as protein or DNA sequence sets
#352
cshenry
closed
2 years ago
2
merge Develop to master (review in feature branch)
#351
dcchivian
closed
2 years ago
1
Dylan 20220926
#350
dcchivian
closed
2 years ago
1
PTV-1728 add metagenome as option for assembly import
#349
dcchivian
closed
2 years ago
2
PTV-1728 add metagenome as option for assembly import
#348
dcchivian
closed
2 years ago
1
sync develop from master
#347
dcchivian
closed
2 years ago
2
bump version
#346
Tianhao-Gu
closed
2 years ago
1
Updated SRA Toolkit to 2.11.0
#345
Tianhao-Gu
closed
2 years ago
1
PUBLIC-2035 Update spec.json to point to release for taxonomy_re_api
#344
bio-boris
opened
2 years ago
3
DATAUP-742: Add exact_match_on field to the GFF genome uploader
#343
MrCreosote
closed
2 years ago
3
DATAUP-742: Add exact_match_on field to Genbank uploader
#342
MrCreosote
closed
2 years ago
5
fix code warnnings
#341
Tianhao-Gu
closed
2 years ago
5
recover genbank importer test
#340
Tianhao-Gu
closed
2 years ago
2
Fix tests
#339
Tianhao-Gu
closed
2 years ago
2
SAM-84 - fix tests
#338
Tianhao-Gu
closed
2 years ago
1
Link to upload/download guide is broken in many apps
#337
MrCreosote
opened
2 years ago
0
DATAUP-591: normalise casing in display.yaml files
#336
ialarmedalien
closed
3 years ago
1
add flake8 workflow
#335
Tianhao-Gu
closed
3 years ago
1
SCT-3032 directly upload staging file
#334
Tianhao-Gu
closed
3 years ago
1
Bump version
#333
MrCreosote
closed
3 years ago
1
Add valid_ws_types to sra and interleaved reads
#332
MrCreosote
closed
3 years ago
1
DATAUP-562: Require at least 1 file for reads uploaders
#331
MrCreosote
closed
3 years ago
2
Modified UI spec of import_genbank_as_genome_from_staging and import_…
#330
qzzhang
closed
3 years ago
1
Plant taxon
#329
qzzhang
closed
3 years ago
8
Assembly report stats section shows no data
#328
MrCreosote
opened
3 years ago
0
Reads object can appear in the data panel long before the job completes
#327
MrCreosote
opened
3 years ago
0
SRA reads extraction command is a single string rather than an array of strings
#326
MrCreosote
opened
3 years ago
0
SRR000001.sra fails to import
#325
MrCreosote
opened
3 years ago
5
DATAUP-477: Fix non-int fastq app from always specifing interleaved is true
#324
MrCreosote
closed
3 years ago
3
PTV-1672 fix GFF upload form labels and new dropdown values
#323
jkbaumohl
closed
3 years ago
2
Move reads error checking to ReadUtils as appropriate
#322
MrCreosote
opened
3 years ago
0
Nonsensical mean & stddev length for read sizes
#321
MrCreosote
opened
3 years ago
0
PTV-1657 fix: enable upload of files larger than 2gb in compressed web files
#320
dauglyon
closed
3 years ago
1
PTV-1657 fix: enable upload of files larger than 2gb in compressed web files
#319
dauglyon
closed
3 years ago
2
Run tests for all pull/push
#318
bio-boris
closed
3 years ago
1
Fixes for new UIs for FASTQ/SRA Importers
#317
bio-boris
closed
3 years ago
1
New upload UIs version bump
#316
bio-boris
closed
3 years ago
1
Update documentation for in use and deprecated apps
#315
bio-boris
opened
3 years ago
0
Add new upload uis
#314
bio-boris
closed
3 years ago
1
Fix Tests
#313
bio-boris
closed
3 years ago
1
Adding Actions workflow for KB SDK tests.
#312
Tianhao-Gu
closed
3 years ago
1
fix gcc error
#311
Tianhao-Gu
closed
3 years ago
2
DATAUP-265 Add New UIs to FastQ/SRA
#310
bio-boris
closed
3 years ago
1
working on sra
#309
bio-boris
closed
3 years ago
1
update description
#308
Tianhao-Gu
closed
4 years ago
1
Ticket PTV-1399 - proper file names for output
#307
landml
closed
4 years ago
3
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