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khanlab
/
snakebids
Snakemake + BIDS
https://snakebids.readthedocs.io
MIT License
17
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14
forks
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Merge updated test timings
#456
github-actions[bot]
closed
1 month ago
0
Deduplicate wildcards when parsing components
#455
pvandyken
closed
1 month ago
1
Transition from zip-list to entry core
#454
pvandyken
opened
1 month ago
0
Update dependencies in template documentation
#453
pvandyken
closed
1 month ago
2
Add compatibility for urls in `generate_inputs`
#452
Karl5766
closed
1 month ago
11
Support for Cloud Storage URLs (with universal_pathlib)
#451
pvandyken
closed
1 month ago
3
Add codespell support (config, workflow to detect/not fix) and make it fix few typos
#449
yarikoptic
closed
1 month ago
7
Merge updated test timings
#448
github-actions[bot]
closed
1 month ago
0
Do coverage upload in one workflow
#446
pvandyken
closed
1 month ago
0
Do codecov upload with tests and delay notifcation
#445
pvandyken
closed
1 month ago
0
Specify sha and PR number in codecov upload
#444
pvandyken
closed
1 month ago
0
Add CLI argument in BidsValidator plugin
#443
pvandyken
closed
1 month ago
1
Allow regex from the cli
#442
pvandyken
closed
1 month ago
1
Add pattern to coverage upload action
#441
pvandyken
closed
1 month ago
0
Fix comparison syntax in tet counting logic
#440
pvandyken
closed
2 months ago
0
Update dependencies
#439
pvandyken
closed
1 month ago
0
Using dictionary operations for `bids()` and `expand()`
#437
Karl5766
closed
2 months ago
0
[.github/actions/build-test-container]: Bump docker/build-push-action from 5 to 6 in /.github/actions/build-test-container in the github-actions group
#436
dependabot[bot]
closed
2 months ago
0
Merge updated test timings
#435
github-actions[bot]
closed
2 months ago
0
Snakebids create docs
#434
akhanf
opened
3 months ago
3
Merge updated test timings
#433
github-actions[bot]
closed
3 months ago
0
Merge updated test timings
#432
github-actions[bot]
closed
3 months ago
0
Add name to upload_coverage
#431
pvandyken
closed
4 months ago
0
Run tests only when snakebids or scripts folder updated
#430
pvandyken
closed
4 months ago
0
Move upload_coverage to seperate workflow
#429
pvandyken
closed
4 months ago
0
Add labeller action
#428
pvandyken
closed
4 months ago
1
Prevent bids values with leading 0s in tests
#427
pvandyken
closed
4 months ago
1
Add skip_changelog label to test timing update PRs
#426
pvandyken
closed
4 months ago
0
Update argument handling for --derivatives
#425
pvandyken
closed
4 months ago
1
Remove return from run method on Runner
#424
pvandyken
closed
4 months ago
1
Merge updated test timings
#423
github-actions[bot]
closed
4 months ago
0
Wildcards added via cli are not deduplicated
#422
pvandyken
closed
1 month ago
0
Add converters to SnakeBidsApp
#421
pvandyken
closed
4 months ago
1
Update dependencies
#420
pvandyken
closed
4 months ago
1
Another fix to test counting
#419
pvandyken
closed
4 months ago
1
Merge updated test timings
#418
github-actions[bot]
closed
4 months ago
0
Add hook to update and read argv before parsing
#417
pvandyken
closed
4 months ago
1
Add missing spaces to default help for bidsargs
#416
pvandyken
closed
4 months ago
1
Update maximum python version in template
#415
pvandyken
closed
4 months ago
1
Fix test-counting code
#414
pvandyken
closed
4 months ago
1
Merge updated test timings
#413
github-actions[bot]
closed
4 months ago
0
Version plugin does not add CLI parameter
#412
pvandyken
opened
4 months ago
0
Default help messages for BidsArgs is missing spaces
#411
pvandyken
closed
4 months ago
0
Template still imposes python < 3.13
#410
pvandyken
closed
4 months ago
0
Add codecov badge
#409
pvandyken
closed
4 months ago
1
Update tutorial for new bidsapp
#408
pvandyken
closed
4 months ago
1
Remove reproducible-containers/buildkit-cache-dance
#407
pvandyken
closed
4 months ago
1
Add support for snakemake > 8.0
#406
pvandyken
closed
4 months ago
0
Fix flaky template tests
#405
pvandyken
closed
4 months ago
0
Allow simult. use of partic incl and excl flags
#404
pvandyken
closed
4 months ago
1
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