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kmayerb
/
tcrdist3
flexible CDR based distance metrics
MIT License
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Some distances silently not computed (for identical entries)
#59
andreas-wilm
closed
2 years ago
4
Added a missing argument when calling _synthesize_vj_matched_background
#58
zozo123
closed
2 years ago
4
ValueError: zero-size array to reduction operation maximum which has no identity
#57
Lihua1990
closed
3 years ago
4
Question: Combined distance matrix for alpha and beta
#56
andreas-wilm
closed
3 years ago
8
Error in "Hello tcrdist3"
#55
aoki0623mriid2
closed
2 years ago
3
argument controls on # of synthetic genes
#54
kmayerb
closed
3 years ago
0
Add join.py
#53
kmayerb
closed
3 years ago
0
ValueError: zero-size array to reduction operation maximum which has no identity
#52
BioLaoXu
closed
3 years ago
1
Add stop and warn for large TCRrep input
#51
kmayerb
closed
3 years ago
0
Breadth Function
#50
kmayerb
closed
3 years ago
0
Add path to base in test workflow 2
#49
kmayerb
closed
3 years ago
0
Documentation of meta-clonotype discovery
#48
andreas-wilm
closed
3 years ago
2
Code examples in documentation
#47
andreas-wilm
closed
3 years ago
1
Add vdjtools_funcs + test + docs
#46
kmayerb
closed
3 years ago
0
AssertionError: daemonic processes are not allowed to have children
#45
pixuenan
closed
3 years ago
2
Some of the mouse TRBV is missing
#44
marshelma
opened
3 years ago
1
Update adpt_funcs.py
#43
kmayerb
closed
3 years ago
0
import_adaptive_file function drops subject data
#42
grhogg
closed
3 years ago
4
Added comments to ecdf about sparse encoding
#41
agartland
closed
3 years ago
0
Alert user that Import Adaptive needs organism and chain information.
#40
kmayerb
opened
3 years ago
0
Alpha metaclonotypes
#39
jeremycfd
closed
3 years ago
4
Change TOCtree on docs
#38
kmayerb
closed
3 years ago
0
Add PGEN tests for mouse
#37
kmayerb
closed
3 years ago
0
edit docs [skip ci]
#36
kmayerb
closed
3 years ago
0
add more docs
#35
kmayerb
closed
3 years ago
0
Parasail dependency (OSX install difficulty)
#34
kmayerb
opened
3 years ago
0
Avoid jedi==0.18.0 IPyhton crashes
#33
kmayerb
opened
3 years ago
0
A really basic example of getting started with video
#32
kmayerb
closed
3 years ago
0
Set to version 0.1.9
#31
kmayerb
closed
3 years ago
0
bump to 1.8 change docker base image post Nov2020
#30
kmayerb
closed
3 years ago
0
add tabulator
#29
kmayerb
closed
3 years ago
1
Add low_pass argument
#28
kmayerb
closed
3 years ago
0
Update text
#27
kmayerb
closed
3 years ago
0
add illustrative test
#26
kmayerb
closed
3 years ago
0
Framework
#25
kmayerb
closed
3 years ago
1
Add quasi-public report feature
#24
kmayerb
closed
3 years ago
0
Embrace sparsity
#23
agartland
closed
3 years ago
0
CSV mapper
#22
agartland
closed
3 years ago
0
Updating ECDFs and fixing warnings
#21
agartland
closed
3 years ago
0
Fix Indents on test for docs
#20
kmayerb
closed
3 years ago
0
Add examples for making trees ex13,14,15,16
#19
kmayerb
closed
3 years ago
0
Add note on compute_distances
#18
kmayerb
closed
3 years ago
0
Adding ECDF functions
#17
agartland
closed
3 years ago
0
Add out of memory compute functions
#16
kmayerb
closed
3 years ago
0
Stage ecdf
#15
kmayerb
closed
3 years ago
0
Update df to df_pop
#14
kmayerb
closed
4 years ago
0
Pgen, Olga Sampler, TCRtree
#13
kmayerb
closed
4 years ago
0
Change np.zeros() init to int16 type
#12
kmayerb
closed
4 years ago
0
Add simulate.rst [skip ci]
#11
kmayerb
closed
4 years ago
0
Add docs on simulating PGENs
#10
kmayerb
closed
4 years ago
0
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